BLASTX nr result

ID: Cnidium21_contig00048271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048271
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [S...   114   8e-24
ref|XP_002449634.1| hypothetical protein SORBIDRAFT_05g020460 [S...   108   3e-22
ref|XP_002439987.1| hypothetical protein SORBIDRAFT_09g023900 [S...   106   2e-21
dbj|BAD68127.1| helicase-like protein [Oryza sativa Japonica Group]   103   1e-20
emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]         101   7e-20

>ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [Sorghum bicolor]
            gi|241926716|gb|EER99860.1| hypothetical protein
            SORBIDRAFT_02g042016 [Sorghum bicolor]
          Length = 1261

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
 Frame = -1

Query: 431  WVLDAGDGKLPNIHPDDTISDTEIVILQEYLIRGSSNPVKSTIDVTYPDFVKNM--TSYL 258
            W+LD GDGKLP    ++   +T I I  + L+      + + +++ YPDF +N    SYL
Sbjct: 1057 WLLDLGDGKLPATKHENDEEETWIRIPNDLLLFTEKPKIPALVNIIYPDFKQNYLNASYL 1116

Query: 257  RQRAILTPTNSIVDDINTHLLDLIPSKPYTYFSQXXXXXXXXXXXDYANVFPVEYLNSLN 78
            ++RAILT TN IVDDIN+++L L+P +   Y+S            D   ++P+EYLNSLN
Sbjct: 1117 KERAILTTTNEIVDDINSYILTLVPGEVKEYYSADSISKCFETCNDANILYPIEYLNSLN 1176

Query: 77   MPFIPKHELKLKFGAVVMLMRNLNQ 3
                P+H L LK G  +ML+RN+NQ
Sbjct: 1177 ANNFPQHNLTLKIGVPIMLLRNINQ 1201


>ref|XP_002449634.1| hypothetical protein SORBIDRAFT_05g020460 [Sorghum bicolor]
            gi|241935477|gb|EES08622.1| hypothetical protein
            SORBIDRAFT_05g020460 [Sorghum bicolor]
          Length = 956

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
 Frame = -1

Query: 434  KWVLDAGDGKLPNIHPDDTISDTEIVILQEYLIRGSSNPVKSTIDVTYPDFVKNMTS--Y 261
            KW+LD G+GK+P +  +     + I I  + L+  + + + + ++ TYPDF+ N  S  Y
Sbjct: 673  KWILDIGEGKVPCVAREGETEPSWIKIPSDLLLMNAEDKMSAIVEATYPDFLNNYRSELY 732

Query: 260  LRQRAILTPTNSIVDDINTHLLDLIPSKPYTYFSQXXXXXXXXXXXDYANVFPVEYLNSL 81
            L+ RAILTPTN   + +N H++ L+P     Y S             Y  ++PVE+LNSL
Sbjct: 733  LKGRAILTPTNESSEMVNDHIVSLVPGNCKEYLSCDTISKSGGGHESYELLYPVEFLNSL 792

Query: 80   NMPFIPKHELKLKFGAVVMLMRNLNQ 3
            N    P+H ++LK G  +ML+RNLNQ
Sbjct: 793  NGNNFPQHIIRLKIGVPIMLLRNLNQ 818


>ref|XP_002439987.1| hypothetical protein SORBIDRAFT_09g023900 [Sorghum bicolor]
           gi|241945272|gb|EES18417.1| hypothetical protein
           SORBIDRAFT_09g023900 [Sorghum bicolor]
          Length = 301

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
 Frame = -1

Query: 434 KWVLDAGDGKLPNIHPDDT--ISDT-EIVILQEYLIRGSSNPVKSTIDVTYPDFVKNMTS 264
           +W+L  G+G   N    DT  +SD  E+ I  + LI+ + + +++ ++ T+PDF  N + 
Sbjct: 21  QWILSIGNGSTENNSTSDTNELSDCIEVEIPDDLLIKKAEDKIRALVESTFPDFRSNYSD 80

Query: 263 --YLRQRAILTPTNSIVDDINTHLLDLIPSKPYTYFSQXXXXXXXXXXXDYANVFPVEYL 90
             YL+ RAIL  TN IVD+IN ++L+L+P     Y+S            D   ++P+EYL
Sbjct: 81  PEYLKNRAILATTNEIVDEINEYMLNLLPGNEVEYYSADSISKCTDTCNDADILYPIEYL 140

Query: 89  NSLNMPFIPKHELKLKFGAVVMLMRNLNQ 3
           NSL+    P H+LKLK G  VML+RNLNQ
Sbjct: 141 NSLSANNFPTHKLKLKIGVPVMLLRNLNQ 169


>dbj|BAD68127.1| helicase-like protein [Oryza sativa Japonica Group]
          Length = 1427

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
 Frame = -1

Query: 431  WVLDAGDGKLPNIHPDDTISDTEIVIL---QEYLIRGSSNPVKSTIDVTYPDFVKNM--T 267
            W+LD G+GK+          DT+  I+   +  LI    N ++  +  TYPDF  +    
Sbjct: 1146 WILDIGNGKINTKQSTAQNEDTDTTIILVPENLLINTGENKLEELVKFTYPDFKNSFFNP 1205

Query: 266  SYLRQRAILTPTNSIVDDINTHLLDLIPSKPYTYFSQXXXXXXXXXXXDYANVFPVEYLN 87
            +YL+ RAIL  TN IVD++N ++L L+P++   Y+S            D   ++PVEYLN
Sbjct: 1206 NYLKNRAILATTNEIVDEVNNYILSLVPNQEKEYYSADTLSQCMDTTNDADILYPVEYLN 1265

Query: 86   SLNMPFIPKHELKLKFGAVVMLMRNLNQ 3
            SLN    P H LKLK G  ++L+RNLNQ
Sbjct: 1266 SLNANNFPTHVLKLKVGVPIILLRNLNQ 1293


>emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]
          Length = 1410

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
 Frame = -1

Query: 434 KWVLDAGDGKLPNIHPDDTISDTEIVILQEYLIRGSSNPVKSTIDVTYPDFVKNMTS--Y 261
           KWVLD G+G +P    +D    + + I  + LI+     + + I+  +PD + N  +  Y
Sbjct: 441 KWVLDIGNGTIPATVKNDESEPSWVQIPDDLLIKTDGEKIPALINEVFPDLLNNHRNPEY 500

Query: 260 LRQRAILTPTNSIVDDINTHLLDLIPSKPYTYFSQXXXXXXXXXXXDYANVFPVEYLNSL 81
           L  RAI+ P N+ VDDIN++++++IP K   Y S            DY  ++P E+LNS+
Sbjct: 501 LSCRAIVCPNNATVDDINSYVVNMIPGKEKEYLSCDTICKSCEHIQDYDLLYPTEFLNSI 560

Query: 80  NMPFIPKHELKLKFGAVVMLMRNLNQ 3
           N+   P H L LK G  VML+RNLNQ
Sbjct: 561 NVNNFPNHRLVLKKGVTVMLLRNLNQ 586


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