BLASTX nr result

ID: Cnidium21_contig00048255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048255
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
emb|CBI19956.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002302197.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indi...   146   2e-33
dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protei...   145   4e-33

>ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
           [Vitis vinifera]
          Length = 575

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/112 (69%), Positives = 96/112 (85%)
 Frame = -3

Query: 495 IKHYGCLIDLLGRAGKLKEGYDLIKEMPMRPNDTVWGALLGACRIHSDMEMADCILEEVC 316
           IKHYGCLIDLLGRAG++KE YDLIK MP++PND VWGALLGACR+H DMEMAD ++EE+ 
Sbjct: 457 IKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIV 516

Query: 315 SLESDVSSTDDSHYVLLSNIYAASERWENAERMRTVISSKGILKTPGSSSVM 160
            ++S++SS  DSHYVLLSNIYAAS+RWE AE+MR  +++KG  KT G SS+M
Sbjct: 517 KVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSIM 568


>emb|CBI19956.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/112 (69%), Positives = 96/112 (85%)
 Frame = -3

Query: 495 IKHYGCLIDLLGRAGKLKEGYDLIKEMPMRPNDTVWGALLGACRIHSDMEMADCILEEVC 316
           IKHYGCLIDLLGRAG++KE YDLIK MP++PND VWGALLGACR+H DMEMAD ++EE+ 
Sbjct: 328 IKHYGCLIDLLGRAGRIKEAYDLIKRMPVKPNDVVWGALLGACRVHLDMEMADRVVEEIV 387

Query: 315 SLESDVSSTDDSHYVLLSNIYAASERWENAERMRTVISSKGILKTPGSSSVM 160
            ++S++SS  DSHYVLLSNIYAAS+RWE AE+MR  +++KG  KT G SS+M
Sbjct: 388 KVDSNISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSIM 439


>ref|XP_002302197.1| predicted protein [Populus trichocarpa] gi|222843923|gb|EEE81470.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  154 bits (390), Expect = 5e-36
 Identities = 70/117 (59%), Positives = 91/117 (77%)
 Frame = -3

Query: 501 ASIKHYGCLIDLLGRAGKLKEGYDLIKEMPMRPNDTVWGALLGACRIHSDMEMADCILEE 322
           ASIKHYGCL+DLLGRAG++++ Y LIK MPM+PNDTVWGA LGACRIH D +M + ++E+
Sbjct: 318 ASIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKPNDTVWGAFLGACRIHMDNDMVEQVVED 377

Query: 321 VCSLESDVSSTDDSHYVLLSNIYAASERWENAERMRTVISSKGILKTPGSSSVMLEH 151
           VC+ +S V S +D HY LL NIYA S  WE A R+  V++ +G+ KT G SS+MLE+
Sbjct: 378 VCTSDSSVDSGNDPHYALLLNIYAGSGSWEKAGRVSMVMADRGLQKTSGRSSLMLEN 434


>gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indica Group]
          Length = 548

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/116 (56%), Positives = 90/116 (77%)
 Frame = -3

Query: 501 ASIKHYGCLIDLLGRAGKLKEGYDLIKEMPMRPNDTVWGALLGACRIHSDMEMADCILEE 322
           A+++HYGCL+DLLGRAG+L+E Y+++K M + PN+ +WG+LLGACR+H D EM++ +  E
Sbjct: 416 AAVEHYGCLVDLLGRAGRLREAYEIVKNMLVEPNEVIWGSLLGACRVHGDAEMSELVSSE 475

Query: 321 VCSLESDVSSTDDSHYVLLSNIYAASERWENAERMRTVISSKGILKTPGSSSVMLE 154
           +  L S   ST+D+ Y+LLSNI A+SERWE AERMR  ++  G+ KTPG SSV LE
Sbjct: 476 IHQLHSRRVSTNDAEYILLSNIMASSERWEQAERMRRKMALHGVGKTPGCSSVELE 531


>dbj|BAC06231.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|125572862|gb|EAZ14377.1|
           hypothetical protein OsJ_04297 [Oryza sativa Japonica
           Group] gi|215697551|dbj|BAG91545.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 548

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/116 (55%), Positives = 90/116 (77%)
 Frame = -3

Query: 501 ASIKHYGCLIDLLGRAGKLKEGYDLIKEMPMRPNDTVWGALLGACRIHSDMEMADCILEE 322
           A+++HYGCL+DLLGR+G+L+E Y+++K M + PN+ +WG+LLGACR+H D EM++ +  E
Sbjct: 416 AAVEHYGCLVDLLGRSGRLREAYEIVKNMLVEPNEVIWGSLLGACRVHGDAEMSELVSSE 475

Query: 321 VCSLESDVSSTDDSHYVLLSNIYAASERWENAERMRTVISSKGILKTPGSSSVMLE 154
           +  L S   ST+D+ Y+LLSNI A+SERWE AERMR  ++  G+ KTPG SSV LE
Sbjct: 476 IHQLHSRRVSTNDAEYILLSNIMASSERWEQAERMRRKMALHGVGKTPGCSSVELE 531


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