BLASTX nr result

ID: Cnidium21_contig00048222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048222
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   117   1e-24
ref|XP_002461212.1| hypothetical protein SORBIDRAFT_02g042875 [S...   115   4e-24
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...   112   4e-23
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...   112   4e-23

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 1/159 (0%)
 Frame = -3

Query: 485 EALLNAKVSALMSMSENQWDYDLVVDIFEARDANLILSIPV-NKAETDSWYWKYEKSGNY 309
           E L +A V+ ++ ++E +WD D++VD+F  RD  LI SIP+ N+   DSWYW ++  GNY
Sbjct: 348 EGLEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNY 407

Query: 308 SVKSAYGSIRDGKDQRQGADNSGFWRQLWNLKIPSKLKHFAWRALKGSLPTKDNLRKKHV 129
            VK+ Y  ++       G   + FW + W LKIP+K+++  W+     + T  NLR ++V
Sbjct: 408 LVKNCYRLLQGDL----GRPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYV 463

Query: 128 DVNVTCPVCQITEETTLHSLVTCPYAVECWRISGVQSVF 12
           D++  C  C    ET  H L  C  A ECW + G +  F
Sbjct: 464 DLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSF 502


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
 Frame = -3

Query: 446 MSENQWDYDLVVDIFEARDANLILSIPVN-KAETDSWYWKYEKSGNYSVKSAYGSIRDGK 270
           ++E  W  D + D F ARDA+LILSIP+   +  D   W ++  G Y+ +S YG++R  +
Sbjct: 433 ITEGLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFR 492

Query: 269 DQR----QGADNSGFWRQLWNLKIPSKLKHFAWRALKGSLPTKDNLRKKHVDVNVTCPVC 102
                     D++  W QLW +  P K+ +FAWRA +  LPT+  L  +HVD  + CP+C
Sbjct: 493 QSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPIC 552

Query: 101 QITEETTLHSLVTCPYAVECWRISG---VQSVFGSF 3
           +   ETTLH+LV C  A + W  SG   +Q  FGSF
Sbjct: 553 RSELETTLHALVECVAARDVWDESGLAMLQGNFGSF 588


>ref|XP_002461212.1| hypothetical protein SORBIDRAFT_02g042875 [Sorghum bicolor]
           gi|241924589|gb|EER97733.1| hypothetical protein
           SORBIDRAFT_02g042875 [Sorghum bicolor]
          Length = 518

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
 Frame = -3

Query: 497 RTSSEALLNAKVSALMSMSENQWDYDLVVDIFEARDANLILSIPVNKAETDSWYWKYEKS 318
           RT   A L  +V+ L+      WD+ LV D+F   DA  IL+IPV +   D   W Y+  
Sbjct: 93  RTPRGAALVTRVAELIDPITGTWDHQLVKDLFWEEDAINILAIPVRQNSDDIIAWHYDPK 152

Query: 317 GNYSVKSAYG----------SIRDGKDQRQGADNSG--FWRQLWNLKIPSKLKHFAWRAL 174
           G +SVKSAY            ++ G+  RQGA  S    W+ +W+L+ P K+K F WR  
Sbjct: 153 GIFSVKSAYHVLEGVEEQKRQVQKGETSRQGACTSEDRLWKDIWHLQCPPKIKQFIWRVA 212

Query: 173 KGSLPTKDNLRKKHVDVNVTCPVCQITEETTLHSLVTCPYAVECWRISGVQSV 15
             SL  K N++++HVD++  CPVC   +E   H  + C     CWR   + SV
Sbjct: 213 HNSLAMKMNIKRRHVDLDTRCPVCLRLDEDGGHCFLKCKQMRRCWRELQLDSV 265


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
 Frame = -3

Query: 500 IRTSSEALLNAKVSALMSMSENQWDYDLVVDIFEARDANLILSIPVNKAETDSWYWKYEK 321
           I+T+    L A V  L+      W  DL+  IF   D   I+ IP+     D   W+Y +
Sbjct: 412 IQTNRGNNLVATVDELIDPINFTWGGDLLKTIFWPIDVCRIMQIPIRAGRDDLVAWQYNR 471

Query: 320 SGNYSVKSAYG-------SIRDGKDQRQGADNSGFWRQLWNLKIPSKLKHFAWRALKGSL 162
           SG +SVKSAY          R  + Q   A  S  W++LWNLK+P+K+K F WRALKG +
Sbjct: 472 SGTFSVKSAYHCQWDYKFGERSAQMQASTASRSRLWKRLWNLKVPAKIKIFGWRALKGLV 531

Query: 161 PTKDNLRKKHVDVNVTCPVCQITEETTLHSLVTCPYAVECWRISGVQ 21
           P +  L  +HV  +  CPVCQ   E   H + TC  A + W   GV+
Sbjct: 532 PCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAKQVWNSLGVE 578


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/167 (37%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
 Frame = -3

Query: 500 IRTSSEALLNAKVSALMSMSENQWDYDLVVDIFEARDANLILSIPVNKAETDSWYWKYEK 321
           I+T+    L A V  L+      W  DL+  IF   D   I+ IP+     D   W+Y +
Sbjct: 442 IQTNRGNNLVATVDELIDPINFTWGGDLLKTIFWPIDVCRIMQIPIRAGRDDLVAWQYNR 501

Query: 320 SGNYSVKSAYG-------SIRDGKDQRQGADNSGFWRQLWNLKIPSKLKHFAWRALKGSL 162
           SG +SVKSAY          R  + Q   A  S  W++LWNLK+P+K+K F WRALKG +
Sbjct: 502 SGTFSVKSAYHCQWDYKFGERSAQMQASTASRSRLWKRLWNLKVPAKIKIFGWRALKGLV 561

Query: 161 PTKDNLRKKHVDVNVTCPVCQITEETTLHSLVTCPYAVECWRISGVQ 21
           P +  L  +HV  +  CPVCQ   E   H + TC  A + W   GV+
Sbjct: 562 PCRAILANRHVGDSGGCPVCQNGPEDIKHMIFTCARAKQVWNSLGVE 608


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