BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048203
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   140   8e-32
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   135   3e-30
emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis]                 134   1e-29
emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]                134   1e-29
emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group] gi...   134   1e-29

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  140 bits (354), Expect = 8e-32
 Identities = 61/109 (55%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
 Frame = -1

Query: 324  VKSI-LRDHAEDLRECFETIRRNNMRVNPNKCTFGVSSGKFLGYMVSARGIEANPEKIKA 148
            VKS+   +H   LR+CF+ + R NM++NP+KCTFGV+SG+FLGY+V+ RGIEANP++I A
Sbjct: 941  VKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRGIEANPKQISA 1000

Query: 147  VVDMKAPKTIRDIQKLTGRLAALRRFISRSAEKALPFFEVLRGSKTFEW 1
            ++D+ +P+  R++Q+L GR+AAL RFISRS +K LPF+++LR +K FEW
Sbjct: 1001 IIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKRFEW 1049


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  135 bits (340), Expect = 3e-30
 Identities = 59/101 (58%), Positives = 82/101 (81%)
 Frame = -1

Query: 303  HAEDLRECFETIRRNNMRVNPNKCTFGVSSGKFLGYMVSARGIEANPEKIKAVVDMKAPK 124
            H +DL+E FE +R+ ++++NP KC FGV +GK LG++VS RGIEANP+KI A+  M+ PK
Sbjct: 1154 HGKDLQETFENLRKCSVKLNPEKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPK 1213

Query: 123  TIRDIQKLTGRLAALRRFISRSAEKALPFFEVLRGSKTFEW 1
              R++Q+LTGR+A+L RF+S+SAEK LPFF+ LRG+ TFEW
Sbjct: 1214 NTREVQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANTFEW 1254


>emb|CCI55289.1| PH01B001G05.12 [Phyllostachys edulis]
          Length = 1335

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/109 (59%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = -1

Query: 324  VKSILR-DHAEDLRECFETIRRNNMRVNPNKCTFGVSSGKFLGYMVSARGIEANPEKIKA 148
            VKSI R +H  DL+E F+ IR++ +++NP KC FGVSSGK LG++VS RGIE NPEKI+A
Sbjct: 698  VKSIKRLNHITDLQETFDNIRKHRLKLNPKKCVFGVSSGKLLGFLVSIRGIETNPEKIQA 757

Query: 147  VVDMKAPKTIRDIQKLTGRLAALRRFISRSAEKALPFFEVLRGSKTFEW 1
            +V M+ P T ++IQKLTG +AAL RFI+R  EK LPFF++LR  + FEW
Sbjct: 758  IVQMRPPTTKKEIQKLTGCMAALSRFIARLGEKGLPFFKLLRKHEGFEW 806


>emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]
          Length = 943

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/101 (57%), Positives = 82/101 (81%)
 Frame = -1

Query: 303 HAEDLRECFETIRRNNMRVNPNKCTFGVSSGKFLGYMVSARGIEANPEKIKAVVDMKAPK 124
           H +DL+E FE +R+ ++++NP KC FGV +GK LG++VS RGIEANP+KI A+  M+ PK
Sbjct: 160 HGKDLQETFENLRKYSVKLNPEKCVFGVGAGKLLGFLVSKRGIEANPDKIAAIHQMQPPK 219

Query: 123 TIRDIQKLTGRLAALRRFISRSAEKALPFFEVLRGSKTFEW 1
             R++Q+LTGR+A+L RF+S+SAEK LPFF+ LRG+ +FEW
Sbjct: 220 NTREMQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANSFEW 260


>emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group]
           gi|38344987|emb|CAE02793.2| OSJNBa0011L07.17 [Oryza
           sativa Japonica Group]
          Length = 943

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/101 (57%), Positives = 82/101 (81%)
 Frame = -1

Query: 303 HAEDLRECFETIRRNNMRVNPNKCTFGVSSGKFLGYMVSARGIEANPEKIKAVVDMKAPK 124
           H +DL+E FE +R+ ++++NP KC FGV +GK LG++VS RGIEANP+KI A+  M+ PK
Sbjct: 160 HGKDLQETFENLRKYSVKLNPEKCVFGVGAGKLLGFLVSKRGIEANPDKIAAIHQMQPPK 219

Query: 123 TIRDIQKLTGRLAALRRFISRSAEKALPFFEVLRGSKTFEW 1
             R++Q+LTGR+A+L RF+S+SAEK LPFF+ LRG+ +FEW
Sbjct: 220 NTREMQRLTGRMASLSRFLSKSAEKGLPFFKTLRGANSFEW 260