BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048178
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   125   5e-27
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   125   5e-27
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   125   5e-27
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]   124   1e-26
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   123   2e-26

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/106 (56%), Positives = 82/106 (77%)
 Frame = -1

Query: 323  LHSNFKIKDMGSLKYFLGIEVARSSSGFYLNQRKYVLDLLHDTSLTDAKPSTIPMEQNHL 144
            L S F +KD+G LKYFLGIEV+R++ GFYL+QRKYVLD++ +  L  A+PS  P+EQNH 
Sbjct: 813  LESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHK 872

Query: 143  LTDNTSSFLNPLDITLYRRFVGKLVYLTITRPDLCYSVHILSQFLK 6
            L+ +TS  L+  D + YRR VG+L+YL +TRP+L YSVH L+QF++
Sbjct: 873  LSLSTSPLLS--DSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQ 916


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/106 (56%), Positives = 82/106 (77%)
 Frame = -1

Query: 323  LHSNFKIKDMGSLKYFLGIEVARSSSGFYLNQRKYVLDLLHDTSLTDAKPSTIPMEQNHL 144
            L S F +KD+G LKYFLGIEV+R++ GFYL+QRKYVLD++ +  L  A+PS  P+EQNH 
Sbjct: 813  LESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHK 872

Query: 143  LTDNTSSFLNPLDITLYRRFVGKLVYLTITRPDLCYSVHILSQFLK 6
            L+ +TS  L+  D + YRR VG+L+YL +TRP+L YSVH L+QF++
Sbjct: 873  LSLSTSPLLS--DSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQ 916


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/106 (56%), Positives = 82/106 (77%)
 Frame = -1

Query: 323  LHSNFKIKDMGSLKYFLGIEVARSSSGFYLNQRKYVLDLLHDTSLTDAKPSTIPMEQNHL 144
            L S F +KD+G LKYFLGIEV+R++ GFYL+QRKYVLD++ +  L  A+PS  P+EQNH 
Sbjct: 1172 LESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHK 1231

Query: 143  LTDNTSSFLNPLDITLYRRFVGKLVYLTITRPDLCYSVHILSQFLK 6
            L+ +TS  L+  D + YRR VG+L+YL +TRP+L YSVH L+QF++
Sbjct: 1232 LSLSTSPLLS--DSSRYRRLVGRLIYLVVTRPELSYSVHTLAQFMQ 1275


>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/107 (56%), Positives = 79/107 (73%)
 Frame = -1

Query: 323  LHSNFKIKDMGSLKYFLGIEVARSSSGFYLNQRKYVLDLLHDTSLTDAKPSTIPMEQNHL 144
            LHS+F+IKD+G LKYFLGIEV+RS  G  ++QRKY L++L D     AKP   PMEQN  
Sbjct: 1027 LHSDFRIKDLGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNIK 1086

Query: 143  LTDNTSSFLNPLDITLYRRFVGKLVYLTITRPDLCYSVHILSQFLKA 3
            L+D++    +P   + YRR VG+L+YLTITRPD+ YSVH+LS+F+ A
Sbjct: 1087 LSDSSELLKDP---SQYRRLVGRLIYLTITRPDITYSVHVLSRFMHA 1130


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/107 (56%), Positives = 78/107 (72%)
 Frame = -1

Query: 323  LHSNFKIKDMGSLKYFLGIEVARSSSGFYLNQRKYVLDLLHDTSLTDAKPSTIPMEQNHL 144
            LHS+F+IKD+G LKYFLGIEV+RS  G  ++QRKY L++L D     AKP   PMEQN  
Sbjct: 984  LHSHFRIKDLGDLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTK 1043

Query: 143  LTDNTSSFLNPLDITLYRRFVGKLVYLTITRPDLCYSVHILSQFLKA 3
            L+D+     +P   + YRR VG+L+YLTITRPD+ YSVH+LS+F+ A
Sbjct: 1044 LSDSGELLKDP---SQYRRLVGRLIYLTITRPDITYSVHVLSRFMHA 1087