BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048171
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   175   4e-42
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   137   7e-31
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   137   1e-30
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   130   1e-28
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   125   3e-27

>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/115 (71%), Positives = 99/115 (86%)
 Frame = +2

Query: 2   FFKTGFMPGTINNTYVILLPKIENAVSVKDHRPIYCCTVLYKIISKILTSRLQPIMSSIV 181
           FFKTGFMP  IN TY+ LLPK  N  SVK+ RPI CC+V+YKIISKILTSR+Q +++S+V
Sbjct: 167 FFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVV 226

Query: 182 GEYQAAFIKGRVIFDSILLSHELIKGYGRKNISPRCMMKIDIQKAYDSVEWPFIK 346
            E Q+AF+KGRVIFD+I+LSHEL+K Y RK ISPRCM+KID+QKAY+SVEWPFIK
Sbjct: 227 SENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIK 281


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/115 (57%), Positives = 88/115 (76%)
 Frame = +2

Query: 2   FFKTGFMPGTINNTYVILLPKIENAVSVKDHRPIYCCTVLYKIISKILTSRLQPIMSSIV 181
           FF    M   IN   V LLPK+++A  VK+ RPI CCTV+YKIISK+LT+R++ I+  +V
Sbjct: 484 FFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVV 543

Query: 182 GEYQAAFIKGRVIFDSILLSHELIKGYGRKNISPRCMMKIDIQKAYDSVEWPFIK 346
            E Q+ FI GR I D+ILL+ ELI+GY RK++SPRC+MK+DI+KAYDSVEW F++
Sbjct: 544 NEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLE 598


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/115 (57%), Positives = 87/115 (75%)
 Frame = +2

Query: 2   FFKTGFMPGTINNTYVILLPKIENAVSVKDHRPIYCCTVLYKIISKILTSRLQPIMSSIV 181
           FF+ GFM   IN T V L+PKI+ A   KD+RPI CC+ LYKIISKILT RLQ +++ +V
Sbjct: 487 FFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVV 546

Query: 182 GEYQAAFIKGRVIFDSILLSHELIKGYGRKNISPRCMMKIDIQKAYDSVEWPFIK 346
              Q  FI  R I D+ILL+ ELI+GY R+++SPRC++K+DI+KAYDSVEW F++
Sbjct: 547 DCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLE 601


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/114 (49%), Positives = 88/114 (77%)
 Frame = +2

Query: 2    FFKTGFMPGTINNTYVILLPKIENAVSVKDHRPIYCCTVLYKIISKILTSRLQPIMSSIV 181
            FF  GF+P  +N T + L+PK + A+ +KD+RPI CC VLYK+ISKIL +RL+ ++ S +
Sbjct: 796  FFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFI 855

Query: 182  GEYQAAFIKGRVIFDSILLSHELIKGYGRKNISPRCMMKIDIQKAYDSVEWPFI 343
             + Q+AF+K R++ +++LL+ EL+K Y +++++PRC MKIDI KA+DSV+W F+
Sbjct: 856  LQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFL 909


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/114 (49%), Positives = 83/114 (72%)
 Frame = +2

Query: 2   FFKTGFMPGTINNTYVILLPKIENAVSVKDHRPIYCCTVLYKIISKILTSRLQPIMSSIV 181
           FF  GF+P  IN+T + L+PK   A  +KD+RPI CC VLYK+ISKI+ +RL+ ++   +
Sbjct: 499 FFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFI 558

Query: 182 GEYQAAFIKGRVIFDSILLSHELIKGYGRKNISPRCMMKIDIQKAYDSVEWPFI 343
              Q+AF+K R++ +++LL+ EL+K Y +  IS RC +KIDI KA+DSV+WPF+
Sbjct: 559 AGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFL 612