BLASTX nr result

ID: Cnidium21_contig00048162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048162
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285008.1| PREDICTED: probable serine/threonine-protein...    90   2e-16
emb|CBI20299.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002316895.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_002329133.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_003596750.1| Serine/threonine protein kinase cdk9 [Medica...    82   4e-14

>ref|XP_002285008.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Vitis vinifera]
          Length = 713

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/109 (45%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   KDKHGSSQLDVTRGL-RKPGSYNEAYDFTRKQDDNRHKQTLVGYAN--EDVRSSNRNPLL 173
           ++K GSSQ DV++ + R PGS+ EA + T +QD  +H+    G     ED R ++++P+L
Sbjct: 587 REKSGSSQPDVSKLIVRFPGSFKEASESTIQQDQ-KHQMQGAGRCTQKEDGRMTSKDPVL 645

Query: 174 LGYGSKGHNIRYSGPLLPPAGNVNQMLRDQDRRHVRDKGKQKRVQSEAI 320
           LGYGSKGH I YSGPLL P+G V+QML+D DR+ ++D  ++ R+  E +
Sbjct: 646 LGYGSKGHKIHYSGPLLVPSGKVDQMLKDHDRQ-IQDAERRARLDREKL 693


>emb|CBI20299.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/109 (45%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   KDKHGSSQLDVTRGL-RKPGSYNEAYDFTRKQDDNRHKQTLVGYAN--EDVRSSNRNPLL 173
           ++K GSSQ DV++ + R PGS+ EA + T +QD  +H+    G     ED R ++++P+L
Sbjct: 586 REKSGSSQPDVSKLIVRFPGSFKEASESTIQQDQ-KHQMQGAGRCTQKEDGRMTSKDPVL 644

Query: 174 LGYGSKGHNIRYSGPLLPPAGNVNQMLRDQDRRHVRDKGKQKRVQSEAI 320
           LGYGSKGH I YSGPLL P+G V+QML+D DR+ ++D  ++ R+  E +
Sbjct: 645 LGYGSKGHKIHYSGPLLVPSGKVDQMLKDHDRQ-IQDAERRARLDREKL 692


>ref|XP_002316895.1| predicted protein [Populus trichocarpa] gi|222859960|gb|EEE97507.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
 Frame = +3

Query: 6   DKHGSSQLDVTRGL-RKPGSYNEAYDFTRKQDDNRHKQTLVGY-ANEDVRSSNRNPLLLG 179
           ++ G +Q +V + + R PGS+ E  +   +QD     Q + G+   ED R+S+++P+LLG
Sbjct: 588 ERSGLAQPEVPKLMARFPGSFKETSESFTQQDPRHPSQGVAGFHQKEDGRNSSKDPVLLG 647

Query: 180 YGSKGHNIRYSGPLLPPAGNVNQMLRDQDR------RHVR-DKGKQKRVQSEA 317
           YGSKGH I YSGPL+ P+GNV+QML+D DR      R  R DK K ++VQ+E+
Sbjct: 648 YGSKGHKIHYSGPLIVPSGNVDQMLKDHDRQIQEAVRRARLDKEKVRKVQAES 700


>ref|XP_002329133.1| predicted protein [Populus trichocarpa] gi|222869802|gb|EEF06933.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/114 (42%), Positives = 75/114 (65%), Gaps = 9/114 (7%)
 Frame = +3

Query: 3   KDKHGSSQLDVTRGL-RKPGSYNEAYDFTRKQDDNRHKQTLVG-YANEDVRSSNRNPLLL 176
           +++ G SQ +V + + R PGS+ E  +   +QD  R  Q + G +  ED R+++++P+LL
Sbjct: 587 RERSGLSQPEVPKLMARFPGSFKETSESFAQQDPQRLSQGVAGSHQKEDGRNNSKDPVLL 646

Query: 177 GYGSKGHNIRYSGPLLPPAGNVNQMLRDQDR------RHVR-DKGKQKRVQSEA 317
           GYGSK H I YSGPL+ P+GN++QML+D DR      R  R DK + ++VQ+E+
Sbjct: 647 GYGSKAHKIHYSGPLIVPSGNMDQMLKDHDRQIQEAVRRARFDKARVRKVQAES 700


>ref|XP_003596750.1| Serine/threonine protein kinase cdk9 [Medicago truncatula]
           gi|355485798|gb|AES67001.1| Serine/threonine protein
           kinase cdk9 [Medicago truncatula]
          Length = 712

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 47/112 (41%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
 Frame = +3

Query: 3   KDKHGSSQLDVTRGL-RKPGSYNEAYDFTRKQDDNRHKQTLVGYANEDVRSSNRNPLLLG 179
           ++  GSSQ++  + + R PGS+ EA +   +Q+ N+ K  +     ED + SN++P  +G
Sbjct: 589 RESSGSSQVEAPKLITRFPGSFKEASESLMQQNQNQ-KHHVHASQKEDAKGSNKDPNNVG 647

Query: 180 YGSKGHNIRYSGPLLPPAGNVNQMLRDQDR------RHVR-DKGKQKRVQSE 314
           YGSKG+ I YSGPLL P+ N++QML+D DR      R  R DK K +R+Q+E
Sbjct: 648 YGSKGYKIHYSGPLLVPSSNMDQMLKDHDRQIQEAVRRARLDKAKMRRLQAE 699


Top