BLASTX nr result

ID: Cnidium21_contig00048155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048155
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
gb|EAY83186.1| hypothetical protein OsI_38395 [Oryza sativa Indi...   120   1e-25
gb|EAY76396.1| hypothetical protein OsI_04325 [Oryza sativa Indi...   120   1e-25
ref|XP_003600291.1| Zinc finger MYM-type protein [Medicago trunc...   112   3e-25
ref|XP_003579414.1| PREDICTED: zinc finger MYM-type protein 1-li...   116   2e-24

>ref|XP_002336707.1| predicted protein [Populus trichocarpa] gi|222836562|gb|EEE74969.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/118 (50%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   KRINDNERCAFLVHIG-GCNSPHKKAVKSLDGLKNVTRHIDKVINCQSLEDVKKNRLRLK 177
           K++ND ERCAFL H+G G NS H+ A + L+ LKN + HI+KV+  Q+ +++  NRLR+K
Sbjct: 85  KKVNDGERCAFLTHMGKGPNSAHRFATRCLENLKNQSCHIEKVVKRQTTQEILNNRLRIK 144

Query: 178 ATIEAVRWLSLQACALRGHDESSTSRNRGNLIEMVKLFGRMNVDISNVVLENAPKNAQ 351
           A+I+ VRWL+ QACA +GHDE   S+NRGN +EM++L    N  +  +VL NAP+NA+
Sbjct: 145 ASIDIVRWLTFQACAFKGHDERPESKNRGNFLEMMELLASYNEQVGALVLGNAPQNAK 202


>gb|EAY83186.1| hypothetical protein OsI_38395 [Oryza sativa Indica Group]
          Length = 809

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/119 (47%), Positives = 76/119 (63%)
 Frame = +1

Query: 1   KRINDNERCAFLVHIGGCNSPHKKAVKSLDGLKNVTRHIDKVINCQSLEDVKKNRLRLKA 180
           K++N+ + CAFL H+G   S H  +V   + LKN   HID+ +  Q  +     RLRL  
Sbjct: 151 KKVNEGKECAFLKHMGNSGSAHNYSVGCFNNLKNSMAHIDRAVIAQKEKLFAGARLRLTT 210

Query: 181 TIEAVRWLSLQACALRGHDESSTSRNRGNLIEMVKLFGRMNVDISNVVLENAPKNAQIL 357
           TIE++RWL+LQ C  RGHDES  S NRGN +EMVKL    N ++  VVLENAP+NA+ +
Sbjct: 211 TIESIRWLTLQGCPFRGHDESINSLNRGNFLEMVKLLASFNKEVKEVVLENAPRNAKYI 269


>gb|EAY76396.1| hypothetical protein OsI_04325 [Oryza sativa Indica Group]
          Length = 601

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/119 (47%), Positives = 76/119 (63%)
 Frame = +1

Query: 1   KRINDNERCAFLVHIGGCNSPHKKAVKSLDGLKNVTRHIDKVINCQSLEDVKKNRLRLKA 180
           K++N+ + CAFL H+G   S H  +V   + LKN   HID+ +  Q  +     RLRL  
Sbjct: 151 KKVNEGKECAFLKHMGNSGSAHNYSVGCFNNLKNSMAHIDRAVIAQKEKLFAGARLRLTT 210

Query: 181 TIEAVRWLSLQACALRGHDESSTSRNRGNLIEMVKLFGRMNVDISNVVLENAPKNAQIL 357
           TIE++RWL+LQ C  RGHDES  S NRGN +EMVKL    N ++  VVLENAP+NA+ +
Sbjct: 211 TIESIRWLTLQGCPFRGHDESINSLNRGNFLEMVKLLASFNKEVKEVVLENAPRNAKYI 269


>ref|XP_003600291.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355489339|gb|AES70542.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 722

 Score =  112 bits (280), Expect(2) = 3e-25
 Identities = 57/119 (47%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
 Frame = +1

Query: 1   KRINDNERCAFLVHIGG--CNSPHKKAVKSLDGLKNVTRHIDKVINCQSLEDVKKNRLRL 174
           KR+ D + CAF+ HIG   C S H  AVK+ + L N   HI      QS   +  NRLRL
Sbjct: 123 KRVRDGKNCAFIKHIGKDPC-SHHNNAVKACNDLLNQRAHIRHGFQKQSSSQIMNNRLRL 181

Query: 175 KATIEAVRWLSLQACALRGHDESSTSRNRGNLIEMVKLFGRMNVDISNVVLENAPKNAQ 351
           KA+I+ VRWL+LQ CA RGHDE+  S+N+GN +E++KL    N +++ VVL NAP N +
Sbjct: 182 KASIDVVRWLTLQTCAFRGHDENVISKNQGNFLELLKLLASYNDEVAQVVLNNAPNNGK 240



 Score = 27.7 bits (60), Expect(2) = 3e-25
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 348 SNIVLRFVDIHGVIRERFFDI 410
           S   ++FVD  G+I+ERFFD+
Sbjct: 269 SKFCMKFVDKDGLIQERFFDM 289


>ref|XP_003579414.1| PREDICTED: zinc finger MYM-type protein 1-like [Brachypodium
           distachyon]
          Length = 848

 Score =  116 bits (291), Expect = 2e-24
 Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   KRINDNERCAFLVHIG-GCNSPHKKAVKSLDGLKNVTRHIDKVINCQSLEDVKKNRLRLK 177
           K++N  + CAFL H+G   NS H  +V+S   LKN   HIDK I   S + +   R RLK
Sbjct: 188 KKVNAGKNCAFLTHMGKDSNSAHNFSVRSFHSLKNSMTHIDKAIVQASAKMIGNARQRLK 247

Query: 178 ATIEAVRWLSLQACALRGHDESSTSRNRGNLIEMVKLFGRMNVDISNVVLENAPKNAQ 351
            TI+++RWL+ QACA RGHDES  S N+GN +E++KL    N +++ V+L+NAP+NA+
Sbjct: 248 VTIDSIRWLTFQACAFRGHDESPGSINQGNFLELIKLLALYNKEVNEVILQNAPRNAK 305


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