BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048150
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...   112   2e-23
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   109   2e-22
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        109   3e-22
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   107   1e-21
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja...   107   1e-21

>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711344|gb|ABF99139.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1394

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = +3

Query: 120 KLNRGEEKNIDSNLWYLDNGASNHMMGQHSKFKELDERVTGQVKFGDGSTVDIKGKGSVV 299
           KL   +   +  N+WYLDNGASNHM G   KF+ELDE +TG V+FGD S+V IKGKGS++
Sbjct: 326 KLLLADSGAMAGNVWYLDNGASNHMTGDRKKFRELDESITGSVRFGDASSVQIKGKGSIL 385

Query: 300 FKCKNGEELVFKEVYDIPTLCSNIISL 380
           F CKNG++ + ++VY IP+LC N++SL
Sbjct: 386 FSCKNGDQWLLQDVYYIPSLCCNMVSL 412


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/87 (57%), Positives = 65/87 (74%)
 Frame = +3

Query: 120 KLNRGEEKNIDSNLWYLDNGASNHMMGQHSKFKELDERVTGQVKFGDGSTVDIKGKGSVV 299
           +L   E+     +LWYLDNGASNHM G H KF+ELDE VTGQV+FGD S+V I GKGS++
Sbjct: 300 RLMLAEKGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSIL 359

Query: 300 FKCKNGEELVFKEVYDIPTLCSNIISL 380
           F CKNG++ +  +VY IP+L  N++SL
Sbjct: 360 FSCKNGDQWLLDDVYYIPSLYCNMVSL 386


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +3

Query: 120 KLNRGEEKNIDSNLWYLDNGASNHMMGQHSKFKELDERVTGQVKFGDGSTVDIKGKGSVV 299
           +L   E+     +LWYLDNGASNHM G   KF+ELDE VTGQV+FGD S+V I G+GS++
Sbjct: 160 RLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSIL 219

Query: 300 FKCKNGEELVFKEVYDIPTLCSNIISL 380
           F CKNG++ +  +VY IP+LC N++SL
Sbjct: 220 FSCKNGDQWLLDDVYYIPSLCCNMVSL 246


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +3

Query: 120 KLNRGEEKNIDSNLWYLDNGASNHMMGQHSKFKELDERVTGQVKFGDGSTVDIKGKGSVV 299
           +L   E+     +LWYLDNGASNHM G   KF+ELDE +TGQV+FGD S+V I G GS++
Sbjct: 194 RLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGDASSVQIMGMGSIL 253

Query: 300 FKCKNGEELVFKEVYDIPTLCSNIISL 380
           F CKNG++ +  +VY IP+LC N++SL
Sbjct: 254 FSCKNGDQWLLDDVYYIPSLCCNMVSL 280


>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1217

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/87 (55%), Positives = 64/87 (73%)
 Frame = +3

Query: 120 KLNRGEEKNIDSNLWYLDNGASNHMMGQHSKFKELDERVTGQVKFGDGSTVDIKGKGSVV 299
           +L   E+     +LWYLDNGASNHM G   KF+ELDE +TGQV+FGD S+V I G GS++
Sbjct: 338 RLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGDASSVQIMGMGSIL 397

Query: 300 FKCKNGEELVFKEVYDIPTLCSNIISL 380
           F CKNG++ +  +VY IP+LC N++SL
Sbjct: 398 FSCKNGDQWLLDDVYYIPSLCCNMVSL 424