BLASTX nr result

ID: Cnidium21_contig00048142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048142
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567455.4| protein FAR-RED IMPAIRED RESPONSE 1 [Arabidopsi...    60   2e-07
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      59   5e-07
ref|XP_003597457.1| FAR1-related protein [Medicago truncatula] g...    58   9e-07
ref|XP_002263562.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...    57   1e-06
emb|CAN75286.1| hypothetical protein VITISV_037637 [Vitis vinifera]    57   1e-06

>ref|NP_567455.4| protein FAR-RED IMPAIRED RESPONSE 1 [Arabidopsis thaliana]
           gi|75213095|sp|Q9SWG3.1|FAR1_ARATH RecName: Full=Protein
           FAR-RED IMPAIRED RESPONSE 1
           gi|5764395|gb|AAD51282.1|AF159587_1 far-red impaired
           response protein [Arabidopsis thaliana]
           gi|332658153|gb|AEE83553.1| protein FAR-RED IMPAIRED
           RESPONSE 1 [Arabidopsis thaliana]
          Length = 827

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
 Frame = -1

Query: 312 KDKLFQVDLVLSSNDVTCNCNLFTRVGYPCRHSFYCLGLSGIEKIPPQLLTKRWMKNSVE 133
           KD  F V    + +++ C C +F   G+ CRH+   L + G   IPPQ + KRW K++  
Sbjct: 551 KDDDFLVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRWTKDA-- 608

Query: 132 KYSTIHGQPSDSCSNEEKR--KATTKQVWVEFQGCVNEVSYNV 10
           K   + G+ +D      +R     ++   +  +GCV+E +YN+
Sbjct: 609 KSGVLAGEGADQIQTRVQRYNDLCSRATELSEEGCVSEENYNI 651


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
 Frame = -1

Query: 330 IRDNFVKDKLFQVDLVLSSNDVTCNCNLFTRVGYPCRHSFYCLGLSGIEKIPPQLLTKRW 151
           I DN V+ K  +V   LS+N   C+C +F   G PCRH  + L   G  +IP   +  RW
Sbjct: 596 ILDNAVR-KHREVVYCLSNNIAHCSCKMFESEGIPCRHILFILKGKGFSEIPSHYIVNRW 654

Query: 150 MKNSVEK-YSTIHGQPSDSCSNEEKRKATTKQVWVEFQGCVNEVSYNVEAL 1
            K +  K      G   ++CS  E       + W +   C++    N E L
Sbjct: 655 TKLATSKPIFDCDGNVLEACSKFESESTLVSKTWSQLLKCMHMAGTNKEKL 705


>ref|XP_003597457.1| FAR1-related protein [Medicago truncatula]
           gi|355486505|gb|AES67708.1| FAR1-related protein
           [Medicago truncatula]
          Length = 741

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/65 (35%), Positives = 41/65 (63%)
 Frame = -1

Query: 321 NFVKDKLFQVDLVLSSNDVTCNCNLFTRVGYPCRHSFYCLGLSGIEKIPPQLLTKRWMKN 142
           +F  ++ + V+   S++D+ C+C+LF   GY CRH+   L +SG+  IPP+ + KRW   
Sbjct: 500 DFENNQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILKRWTNV 559

Query: 141 SVEKY 127
           ++ +Y
Sbjct: 560 ALSRY 564


>ref|XP_002263562.2| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Vitis vinifera]
          Length = 710

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = -1

Query: 330 IRDNFVKDKLFQVDLVLSSNDVTCNCNLFTRVGYPCRHSFYCLGLSGIEKIPPQLLTKRW 151
           + +N  + + ++V    S  +V C C LF   GY CRH+   L  +G+E+IPPQ +  RW
Sbjct: 582 VEENRRETRDYEVSFDTSEMEVFCVCGLFNFKGYLCRHALTVLNQNGMEEIPPQYILSRW 641

Query: 150 MKNSVEKYSTIHG 112
            K++   Y   HG
Sbjct: 642 RKDTKRTYVLDHG 654


>emb|CAN75286.1| hypothetical protein VITISV_037637 [Vitis vinifera]
          Length = 1065

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = -1

Query: 330  IRDNFVKDKLFQVDLVLSSNDVTCNCNLFTRVGYPCRHSFYCLGLSGIEKIPPQLLTKRW 151
            + +N  + + ++V    S  +V C C LF   GY CRH+   L  +G+E+IPPQ +  RW
Sbjct: 937  VEENRRETRDYEVSFDTSEMEVFCVCGLFNFKGYLCRHALTVLNQNGMEEIPPQYILSRW 996

Query: 150  MKNSVEKYSTIHG 112
             K++   Y   HG
Sbjct: 997  RKDTKRTYVLDHG 1009


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