BLASTX nr result

ID: Cnidium21_contig00048128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048128
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                      78   8e-13
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                      78   8e-13
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                      78   8e-13
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    77   1e-12
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       77   2e-12

>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
 Frame = -3

Query: 282 SVSKNAKFQPMPSQSTCQYCDKPGHTVKRCFKL-------------FPNLRPQRPTAHHV 142
           S S   ++ P P Q  CQ C   GH+ +RC +L               +  P +P A+ V
Sbjct: 264 STSNRQQYTPRPYQGKCQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMV 323

Query: 141 NASS-NSGNWIVDSGASHHVTSQLSDLSTHQPYEXXXXXXXXXGSGLP 1
           +A+  NSGNW++DSGA+HH+TS L++L+ HQPY          GSGLP
Sbjct: 324 SATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLP 371


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
 Frame = -3

Query: 282 SVSKNAKFQPMPSQSTCQYCDKPGHTVKRCFKL-------------FPNLRPQRPTAHHV 142
           S S   ++ P P Q  CQ C   GH+ +RC +L               +  P +P A+ V
Sbjct: 264 STSNRQQYTPRPYQGKCQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMV 323

Query: 141 NASS-NSGNWIVDSGASHHVTSQLSDLSTHQPYEXXXXXXXXXGSGLP 1
           +A+  NSGNW++DSGA+HH+TS L++L+ HQPY          GSGLP
Sbjct: 324 SATPYNSGNWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLP 371


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
 Frame = -3

Query: 282 SVSKNAKFQPMPSQSTCQYCDKPGHTVKRCFKL-------------FPNLRPQRPTAHHV 142
           S S   ++ P P Q  CQ C   GH+ +RC +L               +  P +P A+ V
Sbjct: 264 STSNRQQYTPRPYQGKCQICSVHGHSARRCPQLQQHAGSYASNQSSSASYAPWQPRANMV 323

Query: 141 NASS-NSGNWIVDSGASHHVTSQLSDLSTHQPYEXXXXXXXXXGSGLP 1
           +A+  NSGNW++DSGA+HH+TS L++L+ HQPY          GSGLP
Sbjct: 324 SATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLP 371


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
 Frame = -3

Query: 318 SSNGSGILPLPTSVS--KNAKFQPMPSQSTCQYCDKPGHTVKRC--FKLFP--------N 175
           SS      P PT  +  ++ +  P P    CQ C   GHT KRC  F+L P         
Sbjct: 151 SSTSGNRFPTPTGANNLRSDRSSPKPYLGYCQICRNQGHTTKRCPSFRLIPIETSTNTST 210

Query: 174 LRPQ---RPTAHHVNASSNSGNWIVDSGASHHVTSQLSDLSTHQPYEXXXXXXXXXGSGL 4
             P    +P AH    +SN+  W++DSGASHH+TS LS+LS H PY          G+GL
Sbjct: 211 ATPNSSCQPKAHFAANTSNTPTWLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGL 270

Query: 3   P 1
           P
Sbjct: 271 P 271


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
 Frame = -3

Query: 282 SVSKNAKFQPMPSQSTCQYCDKPGHTVKRCFKL-------------FPNLRPQRPTAHHV 142
           S +   ++ P P Q  CQ C   GH+ +RC +L               +  P +P A+ V
Sbjct: 264 STTNRQQYTPRPYQGKCQICSVHGHSARRCPQLQQHAGSYASNQSSSSSYAPWQPRANMV 323

Query: 141 NASS-NSGNWIVDSGASHHVTSQLSDLSTHQPYEXXXXXXXXXGSGLP 1
           +A+  NSGNW++DSGA+HH+TS L++L+ HQPY          GSGLP
Sbjct: 324 SATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLP 371


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