BLASTX nr result

ID: Cnidium21_contig00048126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048126
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
           gi|296081374|emb|CBI16807.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  167 bits (423), Expect = 8e-40
 Identities = 77/105 (73%), Positives = 91/105 (86%)
 Frame = -1

Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
           +KF+  IYN LI+GFCQAG IDKAQ+I +FMRRNGC+PDLVTYNVLLNYCCD L+L+EAE
Sbjct: 215 IKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAE 274

Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
            L+ KMER G+ PD YSYNELLKGLCKA+R+D+AY +MVNKM  K
Sbjct: 275 NLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAK 319



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/96 (33%), Positives = 51/96 (53%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           YN+ ++  C   ++D A  +   M   G +PD+VTY +++N  C     D A ++   M 
Sbjct: 117 YNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
           R G +PD  +   L+ GLC   ++D AY+L V  MR
Sbjct: 177 RKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMR 212



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/100 (33%), Positives = 49/100 (49%)
 Frame = -1

Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
           N+  Y+  ISG C+       + +   M R G  PD+  YN+ LN  C    LD A  ++
Sbjct: 78  NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVV 137

Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
             M   G  PD  +Y  ++ GLC+A R D A ++  N +R
Sbjct: 138 QTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVR 177



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/90 (31%), Positives = 44/90 (48%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           + +LI  F + G  + A+ +   M   G  PD V Y  ++++ C    +  A  +   M 
Sbjct: 362 FTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMV 421

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             G+ PD  SYN L+ GLC+A R+  A  L
Sbjct: 422 ESGITPDVVSYNALINGLCRASRVSEAMHL 451


>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/102 (71%), Positives = 86/102 (84%)
 Frame = -1

Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
           VK +T +YN LISGFC+AGRIDKAQAIK+FMRRNGC+PDLVTYNV LNY CD LMLD+A+
Sbjct: 216 VKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAK 275

Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKM 11
           KL+  MER G+ PD YSYN+LLKG+CK +  D+AY LM NKM
Sbjct: 276 KLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 54/96 (56%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           +N+ +      GRID A  +   + +NG KPD+VTY ++++  C +   D A +    M 
Sbjct: 117 FNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMI 176

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
             G +PD+ +   ++ GLC   ++D AY+L+++ M+
Sbjct: 177 HKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMK 212



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/90 (30%), Positives = 48/90 (53%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           YN +I  FC+ G    A  +   M + G  PD+VT+ + +         + A+KL+D+M 
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             GL+PD   Y  ++  LCK+ +++ A+ +
Sbjct: 388 EMGLSPDCIFYTTIIDHLCKSGKVEMAHSI 417



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/87 (29%), Positives = 47/87 (54%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           Y  +I   C++G+++ A +I   M   G  PD++++N L+N  C    + EA  L ++M+
Sbjct: 398 YTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQ 457

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRA 35
             G  PD  +Y  ++ GL +  +I  A
Sbjct: 458 NRGSYPDEVTYKLIIGGLIEEKKISIA 484


>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/105 (61%), Positives = 82/105 (78%)
 Frame = -1

Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
           VK N+ +YN LI GFC+ GR+DKA  IK FM R GC PDLVTYN+LLNYCC+  M+DEA 
Sbjct: 220 VKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAV 279

Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
           +L++ MER G+ PD YSYNELLKG CKA+ +DRA+ +MV +M+ K
Sbjct: 280 RLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/90 (32%), Positives = 50/90 (55%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           Y  ++   C+ G++D A ++   M  NG  PD+++YN LLN  C    + +A  L D+M+
Sbjct: 402 YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQ 461

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             GL PD  +Y  ++ GL +  +I  A ++
Sbjct: 462 SKGLYPDEVTYKLIVGGLIRGKKISLACRV 491



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/96 (30%), Positives = 54/96 (56%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           +N  ++  C+  R++ A  +   M   G  PD+V+Y ++++  C+    DEA K+  ++ 
Sbjct: 122 FNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
             GL+PD  +   L+ GLC   R+D AY+L+V  ++
Sbjct: 182 DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIK 217



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           +N+LI  F + G     + +   M +    PD + Y  ++++ C    +D A  +   M 
Sbjct: 367 FNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMV 426

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             G+NPD  SYN LL G CK  R+  A  L
Sbjct: 427 ENGVNPDVISYNALLNGFCKTSRVMDAMHL 456


>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
           gi|449494962|ref|XP_004159696.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/98 (65%), Positives = 83/98 (84%)
 Frame = -1

Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
           +KFN  I+N L+SGFC++GRI KA AIK+FM ++GC+PDL+TYN+LLN+ CD LML+ A 
Sbjct: 215 MKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAG 274

Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLM 23
           K + KMER G+ PD YSYN+LLKGLCKA+R+D+AYKLM
Sbjct: 275 KSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLM 312



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/90 (37%), Positives = 51/90 (56%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           YN+L++ FC    ++ A      M R G +PD+ +YN LL   C    LD+A KL++ M 
Sbjct: 257 YNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMW 316

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             GL  D+ SYN ++  LCK+    +AY+L
Sbjct: 317 EKGL-CDTVSYNTVIGALCKSFATRKAYRL 345



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/102 (29%), Positives = 53/102 (51%)
 Frame = -1

Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
           + G +  LI  F   G    A+ +   M +    PDL+ Y  +++Y C    ++ A+ + 
Sbjct: 357 DVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVF 416

Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
             M   G++PD  SYN L+ GLCKA ++  A  L+  +M+++
Sbjct: 417 RDMIEIGISPDVVSYNALINGLCKASKVSEA-MLLYEEMQIR 457


>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/99 (64%), Positives = 76/99 (76%)
 Frame = -1

Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
           +T +YN LISGFC+AGRIDKA A+ +FM R GCKPDLVTYNVLLNYCC+  M +EA KL+
Sbjct: 219 STLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLL 278

Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKM 11
            KME   + PD YSYN+LLK  CKA+  D+AY  MV KM
Sbjct: 279 KKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKM 317



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/90 (28%), Positives = 49/90 (54%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           Y  +I   C++G+++ A +I   M   G  PD+V+YN L+N  C  L + E   L ++M 
Sbjct: 398 YTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQML 457

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
           + G  PD  +Y  ++  L + +++  A ++
Sbjct: 458 QRGSFPDEVTYKLIIGALVRENKLSDACRV 487



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/90 (28%), Positives = 43/90 (47%)
 Frame = -1

Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
           + +LI  F + G  D A+ +   M   G  PD + Y  ++++ C    ++ A  +   M 
Sbjct: 363 FTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMV 422

Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
             G+ PD  SYN L+ G CK+ R+     L
Sbjct: 423 EKGITPDVVSYNALINGFCKSLRVGEVMHL 452


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