BLASTX nr result
ID: Cnidium21_contig00048126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00048126
(316 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 167 8e-40
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 156 2e-36
ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 167 bits (423), Expect = 8e-40
Identities = 77/105 (73%), Positives = 91/105 (86%)
Frame = -1
Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
+KF+ IYN LI+GFCQAG IDKAQ+I +FMRRNGC+PDLVTYNVLLNYCCD L+L+EAE
Sbjct: 215 IKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAE 274
Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
L+ KMER G+ PD YSYNELLKGLCKA+R+D+AY +MVNKM K
Sbjct: 275 NLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAK 319
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/96 (33%), Positives = 51/96 (53%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
YN+ ++ C ++D A + M G +PD+VTY +++N C D A ++ M
Sbjct: 117 YNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
R G +PD + L+ GLC ++D AY+L V MR
Sbjct: 177 RKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMR 212
Score = 59.7 bits (143), Expect = 2e-07
Identities = 33/100 (33%), Positives = 49/100 (49%)
Frame = -1
Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
N+ Y+ ISG C+ + + M R G PD+ YN+ LN C LD A ++
Sbjct: 78 NSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVV 137
Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
M G PD +Y ++ GLC+A R D A ++ N +R
Sbjct: 138 QTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVR 177
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/90 (31%), Positives = 44/90 (48%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
+ +LI F + G + A+ + M G PD V Y ++++ C + A + M
Sbjct: 362 FTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMV 421
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
G+ PD SYN L+ GLC+A R+ A L
Sbjct: 422 ESGITPDVVSYNALINGLCRASRVSEAMHL 451
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 156 bits (394), Expect = 2e-36
Identities = 73/102 (71%), Positives = 86/102 (84%)
Frame = -1
Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
VK +T +YN LISGFC+AGRIDKAQAIK+FMRRNGC+PDLVTYNV LNY CD LMLD+A+
Sbjct: 216 VKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAK 275
Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKM 11
KL+ MER G+ PD YSYN+LLKG+CK + D+AY LM NKM
Sbjct: 276 KLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/96 (30%), Positives = 54/96 (56%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
+N+ + GRID A + + +NG KPD+VTY ++++ C + D A + M
Sbjct: 117 FNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMI 176
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
G +PD+ + ++ GLC ++D AY+L+++ M+
Sbjct: 177 HKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMK 212
Score = 58.5 bits (140), Expect = 5e-07
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
YN +I FC+ G A + M + G PD+VT+ + + + A+KL+D+M
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
GL+PD Y ++ LCK+ +++ A+ +
Sbjct: 388 EMGLSPDCIFYTTIIDHLCKSGKVEMAHSI 417
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
Y +I C++G+++ A +I M G PD++++N L+N C + EA L ++M+
Sbjct: 398 YTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQ 457
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRA 35
G PD +Y ++ GL + +I A
Sbjct: 458 NRGSYPDEVTYKLIIGGLIEEKKISIA 484
>ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 146 bits (368), Expect = 2e-33
Identities = 65/105 (61%), Positives = 82/105 (78%)
Frame = -1
Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
VK N+ +YN LI GFC+ GR+DKA IK FM R GC PDLVTYN+LLNYCC+ M+DEA
Sbjct: 220 VKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAV 279
Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
+L++ MER G+ PD YSYNELLKG CKA+ +DRA+ +MV +M+ K
Sbjct: 280 RLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTK 324
Score = 62.8 bits (151), Expect = 3e-08
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
Y ++ C+ G++D A ++ M NG PD+++YN LLN C + +A L D+M+
Sbjct: 402 YTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQ 461
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
GL PD +Y ++ GL + +I A ++
Sbjct: 462 SKGLYPDEVTYKLIVGGLIRGKKISLACRV 491
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/96 (30%), Positives = 54/96 (56%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
+N ++ C+ R++ A + M G PD+V+Y ++++ C+ DEA K+ ++
Sbjct: 122 FNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLI 181
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMR 8
GL+PD + L+ GLC R+D AY+L+V ++
Sbjct: 182 DKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIK 217
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
+N+LI F + G + + M + PD + Y ++++ C +D A + M
Sbjct: 367 FNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMV 426
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
G+NPD SYN LL G CK R+ A L
Sbjct: 427 ENGVNPDVISYNALLNGFCKTSRVMDAMHL 456
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 139 bits (350), Expect = 2e-31
Identities = 64/98 (65%), Positives = 83/98 (84%)
Frame = -1
Query: 316 VKFNTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAE 137
+KFN I+N L+SGFC++GRI KA AIK+FM ++GC+PDL+TYN+LLN+ CD LML+ A
Sbjct: 215 MKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAG 274
Query: 136 KLIDKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLM 23
K + KMER G+ PD YSYN+LLKGLCKA+R+D+AYKLM
Sbjct: 275 KSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLM 312
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/90 (37%), Positives = 51/90 (56%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
YN+L++ FC ++ A M R G +PD+ +YN LL C LD+A KL++ M
Sbjct: 257 YNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMW 316
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
GL D+ SYN ++ LCK+ +AY+L
Sbjct: 317 EKGL-CDTVSYNTVIGALCKSFATRKAYRL 345
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/102 (29%), Positives = 53/102 (51%)
Frame = -1
Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
+ G + LI F G A+ + M + PDL+ Y +++Y C ++ A+ +
Sbjct: 357 DVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVF 416
Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKMRVK 2
M G++PD SYN L+ GLCKA ++ A L+ +M+++
Sbjct: 417 RDMIEIGISPDVVSYNALINGLCKASKVSEA-MLLYEEMQIR 457
>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 135 bits (341), Expect = 3e-30
Identities = 64/99 (64%), Positives = 76/99 (76%)
Frame = -1
Query: 307 NTGIYNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLI 128
+T +YN LISGFC+AGRIDKA A+ +FM R GCKPDLVTYNVLLNYCC+ M +EA KL+
Sbjct: 219 STLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLL 278
Query: 127 DKMERGGLNPDSYSYNELLKGLCKAHRIDRAYKLMVNKM 11
KME + PD YSYN+LLK CKA+ D+AY MV KM
Sbjct: 279 KKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKM 317
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/90 (28%), Positives = 49/90 (54%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
Y +I C++G+++ A +I M G PD+V+YN L+N C L + E L ++M
Sbjct: 398 YTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQML 457
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
+ G PD +Y ++ L + +++ A ++
Sbjct: 458 QRGSFPDEVTYKLIIGALVRENKLSDACRV 487
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/90 (28%), Positives = 43/90 (47%)
Frame = -1
Query: 295 YNVLISGFCQAGRIDKAQAIKTFMRRNGCKPDLVTYNVLLNYCCDMLMLDEAEKLIDKME 116
+ +LI F + G D A+ + M G PD + Y ++++ C ++ A + M
Sbjct: 363 FTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMV 422
Query: 115 RGGLNPDSYSYNELLKGLCKAHRIDRAYKL 26
G+ PD SYN L+ G CK+ R+ L
Sbjct: 423 EKGITPDVVSYNALINGFCKSLRVGEVMHL 452