BLASTX nr result
ID: Cnidium21_contig00048087
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00048087 (345 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 74 1e-11 gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 70 2e-10 emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 69 4e-10 ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820... 68 9e-10 emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera] 68 9e-10 >dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] Length = 1098 Score = 73.9 bits (180), Expect = 1e-11 Identities = 39/88 (44%), Positives = 53/88 (60%) Frame = +3 Query: 6 DKFEHRGVPCIFLGYPPGKKGYRLMNLLTKHEFASRDVIFEESVFPYHPKSSDKLMAPVP 185 DKF R C+F+GYP GKKG+RL +L F SRDV+F+E+VFPY S + P Sbjct: 742 DKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVSRDVVFQETVFPYGTIESSSI--PFS 799 Query: 186 PSMPVQTSNYFDDFEVQDQPAVLDSPTI 269 PSM ++ + DD +Q Q + SPT+ Sbjct: 800 PSMFPPSTIFHDDDWLQPQADISISPTV 827 >gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana] Length = 1152 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Frame = +3 Query: 6 DKFEHRGVPCIFLGYPPGKKGYRLMNLLTKHEFASRDVIFEESVFPY-HPKSSDKLMAP- 179 DKF+ RG CIF+GYP G+KG+R+ ++ ++ F SRDV+F+E +FP+ K+ D +P Sbjct: 753 DKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFVSRDVVFQEDIFPFADKKNKDTFSSPA 812 Query: 180 --VPPSMPVQTSNYFDDFEVQDQPAVLDSPTI 269 +P + + D +++ D PA P I Sbjct: 813 AVIPSPILPYDDEFLDIYQIGDVPATNPLPAI 844 >emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] Length = 1450 Score = 68.9 bits (167), Expect = 4e-10 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 6/97 (6%) Frame = +3 Query: 6 DKFEHRGVPCIFLGYPPGKKGYRLMNLLTKHEFASRDVIFEESVFPY-HPKSSDKLMAPV 182 DKF R C+FLGYP GKKG++L +L TK F SRDV F E VFP+ +P + + ++ + Sbjct: 751 DKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNIILDNI 810 Query: 183 PPSMPVQTSNYF-----DDFEVQDQPAVLDSPTITQP 278 P++ V+ + F DD ++ + A +P + QP Sbjct: 811 VPTVNVEIDSDFADFVDDDADLPNPQAQTQNPNLIQP 847 >ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max] Length = 1057 Score = 67.8 bits (164), Expect = 9e-10 Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 12/102 (11%) Frame = +3 Query: 9 KFEHRGVPCIFLGYPPGKKGYRLMNLLTKHEFASRDVIFEESVFPYHPKSSD----KLMA 176 KF R V FLGYP G KGY+L+NL TK F SRDV F E++FP+ + S+ +L+ Sbjct: 328 KFSPRAVAASFLGYPQGYKGYKLLNLSTKQIFISRDVKFFENIFPFKNQQSNNSDRELLD 387 Query: 177 P-VPPSMPVQT-------SNYFDDFEVQDQPAVLDSPTITQP 278 P V P++ T S+ D + QPA LD T QP Sbjct: 388 PYVTPNLITSTNLDDTDISSITDTLQHTPQPAQLDPATTIQP 429 >emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera] Length = 746 Score = 67.8 bits (164), Expect = 9e-10 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Frame = +3 Query: 9 KFEHRGVPCIFLGYPPGKKGYRLMNLLTKHEFASRDVIFEESVFPYHPKSS-DKLMAPVP 185 KF+ R C+ LGYPPG KGYRL +++TK F S+D IF E +FP+H + DKL+ P P Sbjct: 265 KFQPRSRVCVLLGYPPGIKGYRLYDVVTKQIFISQDAIFHEEIFPFHTATPLDKLIDPFP 324