BLASTX nr result

ID: Cnidium21_contig00048078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048078
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49
ref|XP_002525990.1| protein with unknown function [Ricinus commu...   197   7e-49
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...   187   6e-46
ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chlorop...   182   2e-44
gb|AAG52346.1|AC011663_25 hypothetical protein; 66431-64463 [Ara...   179   2e-43

>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score =  200 bits (508), Expect = 1e-49
 Identities = 99/132 (75%), Positives = 109/132 (82%), Gaps = 4/132 (3%)
 Frame = +1

Query: 28  KACVEVSHQWPEWVEFMEHLLKKGYFDE----VEKGELGGKDANRIRTACLNFGRHRFDL 195
           ++ V++SH WPEWV+ ME LLK+GYF+     V   ELG KDA+ IRTACLNF R RF L
Sbjct: 2   ESTVQISHPWPEWVDLMELLLKRGYFEAGGNPVGNKELGSKDASCIRTACLNFARDRFGL 61

Query: 196 IRYLSRKDIQVIAGSGCPSLDRKVVNSGKRLRAHVGIDEGTVCSSCTLRGDCERAYVKAR 375
           IRY SRKDI VIAG GCPS+DRKVVNSGKRLRAHVGI+EG VCSSC LRGDCERAYVKAR
Sbjct: 62  IRYFSRKDIGVIAGCGCPSIDRKVVNSGKRLRAHVGINEGHVCSSCNLRGDCERAYVKAR 121

Query: 376 EDEWGRTVDVMR 411
           EDE GRTVDVMR
Sbjct: 122 EDEGGRTVDVMR 133


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/137 (68%), Positives = 110/137 (80%), Gaps = 4/137 (2%)
 Frame = +1

Query: 13  NVSKEKACVEVSHQWPEWVEFMEHLLKKGYFDEVEK----GELGGKDANRIRTACLNFGR 180
           +  +  + V++SH WPEWV+ ME LLK+GYF+  E     GELG K+ N IRTACLNF R
Sbjct: 81  HTKRNDSVVQISHPWPEWVDLMEFLLKRGYFEANENPFLNGELGTKETNWIRTACLNFAR 140

Query: 181 HRFDLIRYLSRKDIQVIAGSGCPSLDRKVVNSGKRLRAHVGIDEGTVCSSCTLRGDCERA 360
            +++LIR  SR+DI +IAG GCPS+DRKVVNSGKRLRAHVGIDEG VCSSC LRGDCERA
Sbjct: 141 DQYELIRVFSRRDIHIIAGCGCPSIDRKVVNSGKRLRAHVGIDEGNVCSSCKLRGDCERA 200

Query: 361 YVKAREDEWGRTVDVMR 411
           YVKARE+E GRTVDVMR
Sbjct: 201 YVKARENEGGRTVDVMR 217


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/137 (67%), Positives = 105/137 (76%), Gaps = 5/137 (3%)
 Frame = +1

Query: 16  VSKEKACVEVSHQWPEWVEFMEHLLKKGYFDE-----VEKGELGGKDANRIRTACLNFGR 180
           +S  K+ V   H WPEWV+ ME L KKGY +E      + G +G K+ANRIRTACL+F R
Sbjct: 67  ISPTKSTVRHLHPWPEWVDLMEILTKKGYLEEGDGNPFQNGAMGVKEANRIRTACLDFTR 126

Query: 181 HRFDLIRYLSRKDIQVIAGSGCPSLDRKVVNSGKRLRAHVGIDEGTVCSSCTLRGDCERA 360
            RFDLI Y SRKDI+V+AGSGCPS DRKVVNSGKRLRAHV IDEG VCSSC LRG+CERA
Sbjct: 127 DRFDLISYFSRKDIEVVAGSGCPSTDRKVVNSGKRLRAHVDIDEGNVCSSCILRGNCERA 186

Query: 361 YVKAREDEWGRTVDVMR 411
           YV A E E GRTVD+MR
Sbjct: 187 YVMASEGEGGRTVDLMR 203


>ref|XP_003519994.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Glycine
           max]
          Length = 528

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/139 (60%), Positives = 107/139 (76%), Gaps = 3/139 (2%)
 Frame = +1

Query: 4   VRENVSKEKACVEVSHQWPEWVEFMEHLLKKGYFDEVEKG---ELGGKDANRIRTACLNF 174
           V +   ++++ +++SH WPEW++ M+ L  KG+F   E+     +G KD N +RTACLNF
Sbjct: 61  VDKEEEEQESALQISHPWPEWLQLMKCLHDKGHFSHEERNINAAMGAKDCNVVRTACLNF 120

Query: 175 GRHRFDLIRYLSRKDIQVIAGSGCPSLDRKVVNSGKRLRAHVGIDEGTVCSSCTLRGDCE 354
           GR  F ++R+LSRKDI V    GCPSLDRKV+NSGKRLRA++GIDEG VCSSC LRGDCE
Sbjct: 121 GRDHFHILRFLSRKDIGVTVALGCPSLDRKVINSGKRLRAYIGIDEGNVCSSCNLRGDCE 180

Query: 355 RAYVKAREDEWGRTVDVMR 411
           RA+VKAREDE GRTVD+MR
Sbjct: 181 RAFVKAREDEGGRTVDIMR 199


>gb|AAG52346.1|AC011663_25 hypothetical protein; 66431-64463 [Arabidopsis thaliana]
          Length = 421

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/122 (68%), Positives = 97/122 (79%)
 Frame = +1

Query: 46  SHQWPEWVEFMEHLLKKGYFDEVEKGELGGKDANRIRTACLNFGRHRFDLIRYLSRKDIQ 225
           SH WPEW++ M  L KKGYF+E     +  K++N IRTACLNF RHRF L+R LS+KDI+
Sbjct: 43  SHPWPEWLDLMGMLAKKGYFEESLIPLMSSKESNHIRTACLNFARHRFTLVRNLSKKDIK 102

Query: 226 VIAGSGCPSLDRKVVNSGKRLRAHVGIDEGTVCSSCTLRGDCERAYVKAREDEWGRTVDV 405
           VIAG GCPS DRKVVNSGKRLRA+VGIDEG VC SC LRG CERAY +AR+DE  RT+DV
Sbjct: 103 VIAGCGCPSTDRKVVNSGKRLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTIDV 162

Query: 406 MR 411
           MR
Sbjct: 163 MR 164


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