BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048050
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...   145   4e-33
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar...   127   1e-27

>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/128 (54%), Positives = 92/128 (71%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +QKAF+L  +M+D G++PD  TYNSLI+  LKEGK+ E K+L DDM+ K L+P ADTY+ 
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L++GHC ++DF+GAY WYREM E G  P V ICNEL +GLR +GRL+    I SEM   G
Sbjct: 632 LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691

Query: 362 LFDSSTAE 385
           + +  T E
Sbjct: 692 MDNLDTNE 699



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/111 (33%), Positives = 65/111 (58%)
 Frame = +2

Query: 8   KAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLV 187
           + F +  +M ++G +P+  +Y SLI C  K+GK+ EA+ +  DM  + ++PNA+ YN L+
Sbjct: 365 RCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424

Query: 188 EGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIY 340
           +G C V     A  ++ EMS+ G+   +   N LI GL   G+L+  + ++
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/120 (31%), Positives = 65/120 (54%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++ A  L   M    + P+ F YN LI    KE ++++A++LF +M  + LVPN  T+NT
Sbjct: 82  LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L++G+C+  +   A      M ++ V P +   N L+SGL    R+E    + +E++  G
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/116 (29%), Positives = 63/116 (54%)
 Frame = +2

Query: 29  QMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVE 208
           QM   G++P+C  +NS+I    +   + +A+E    M  K + P+ +TYN L++G+ R+ 
Sbjct: 302 QMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLC 361

Query: 209 DFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGLFDSS 376
            FS  +    EM E G  P V     LI+ L  +G++   +++  +M G+G+  ++
Sbjct: 362 VFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNA 417



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/121 (28%), Positives = 61/121 (50%)
 Frame = +2

Query: 11  AFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVE 190
           A  L+ + I  G++ D +T + L+    KEGKV++A+E+   +    LVP    YNT+V 
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 191 GHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGLFD 370
           G+C++ D   A     +M  +G+ P     N +I    +   ++  +    +M GKG+  
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 371 S 373
           S
Sbjct: 346 S 346



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/101 (31%), Positives = 52/101 (51%)
 Frame = +2

Query: 20  LHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHC 199
           L  +M+  G +PD   Y   ++  +K G +K A ELF+ M+ +++VPN   YN L+ G C
Sbjct: 53  LFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLC 112

Query: 200 RVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLE 322
           + +    A   + EMS + + P     N LI G    G ++
Sbjct: 113 KEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVD 153



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/116 (31%), Positives = 61/116 (52%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +++A     +M  +GI     TYNSLI    K GK+KEA+E+F  + +    P+  TYN+
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEM 349
           L+ G+    +       Y  M + G+ P +   + LISG   EG ++  + +++EM
Sbjct: 493 LISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEM 547



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +  A  L  +M    ++P   T+NSL+    K  +++EA+ + ++++    VP+  TY+ 
Sbjct: 152 VDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSI 211

Query: 182 LVEGHCRVEDFSGAYF-WYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGK 358
           + +G  + +D +GA    YRE   KGV      C+ L++GL  EG++E  + +   +   
Sbjct: 212 IFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEH 271

Query: 359 GL 364
           GL
Sbjct: 272 GL 273



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/111 (30%), Positives = 53/111 (47%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           M+  G+ P+   YN LI      GK++EA   FD+M    +     TYN+L++G C++  
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
              A   +  ++  G  P V   N LISG  + G  +    +Y  M+  GL
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/120 (30%), Positives = 57/120 (47%)
 Frame = +2

Query: 5   QKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTL 184
           QK   L+  M   G++P   T++ LI    KEG +K  + LF++M    L P+   YN +
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAM 562

Query: 185 VEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
           +  +        A+   +EM + GV P     N LI G   EG+L     +  +M+ KGL
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/122 (54%), Positives = 86/122 (70%)
 Frame = +2

Query: 5    QKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTL 184
            QKA++LH  M+D GI PD  TYNSLI+   +EGK+   K+L ++M+ KEL P ADTY+ L
Sbjct: 682  QKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDIL 741

Query: 185  VEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
            V+GHC ++DFSGAY WYREM E    P   ICNEL +GL  EGRL+ V +I SEM  KG+
Sbjct: 742  VKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801

Query: 365  FD 370
             +
Sbjct: 802  IN 803



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/110 (34%), Positives = 63/110 (57%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           M   G++P+ F YN LI    +E ++++A+++FD+M N  LV +  TYNTL++G+C+V +
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
              A+     M EK V P +   N L+SGL    +++    +  EM   G
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNG 311



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/118 (32%), Positives = 64/118 (54%)
 Frame = +2

Query: 8   KAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLV 187
           + F +  QM + G++P+  +Y SLI C  K+GK+ EA+ +  DM  + ++PNA  YN L+
Sbjct: 474 RCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLI 533

Query: 188 EGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           +G C V     A  ++ EM    + P +   N LI GL  +G+L   +   +++   G
Sbjct: 534 DGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/111 (33%), Positives = 55/111 (49%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           MI  G+ P+   YN LI      GKVK+A   FD+M   E+ P   TYN L++G C+   
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
            + A  +  +++  G  P V   N LISG  + G +     +Y  M+  G+
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/121 (29%), Positives = 64/121 (52%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +  AF +  +M +  + P+  T+NSL+    K  K+KEA+ L  +M     +P+  TY+ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L +G  R +D +GA   Y + +EKG+       + L++GL  +G++E  + I  +    G
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 362 L 364
           L
Sbjct: 382 L 382



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLI--MCRLKEGKVKEAKELFDDMRNKELVPNADTY 175
           + KA     +M   G++P+  T+NSLI   C +KE  + +A+E    M  K + P+ +TY
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE--MDKAEEWVKKMAEKGVTPSVETY 459

Query: 176 NTLVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRG 355
           NTL++G+ ++  F   +    +M E GV P V     LI+ L  +G++   +I+  +M  
Sbjct: 460 NTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMIC 519

Query: 356 KGLFDSS 376
           +G+  ++
Sbjct: 520 RGVLPNA 526



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/116 (31%), Positives = 58/116 (50%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++ A     +M+   I P   TYN LI    K+GK+ EA++    + +    P+  TYN+
Sbjct: 542 VKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNS 601

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEM 349
           L+ G+    + S     Y  M   G+ P V   + LISG   EG +E V+ +Y+EM
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEM 656



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/121 (28%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           + K   L+  M + GI+P   TY+ LI    KEG ++  ++L+++M    L+P+   YN 
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNA 670

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           ++  +  + +   AY  ++ M ++G+ P     N LI G   EG+L  +  + + M+ K 
Sbjct: 671 MIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKE 730

Query: 362 L 364
           L
Sbjct: 731 L 731



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/121 (28%), Positives = 57/121 (47%)
 Frame = +2

Query: 11  AFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVE 190
           A  L+ Q  + GI+ + +T + L+    K+GKV++A+E+        LV +   YNT V 
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 191 GHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGLFD 370
           G+CR+ D + A      M   G+ P     N LI    D   ++  +    +M  KG+  
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454

Query: 371 S 373
           S
Sbjct: 455 S 455



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/99 (29%), Positives = 54/99 (54%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++KA  +  +  ++G+  D   YN+ +    + G + +A    + M +  L PN+ T+N+
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISG 298
           L++  C +++   A  W ++M+EKGV P V   N LI G
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465


>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
            mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/128 (50%), Positives = 84/128 (65%)
 Frame = +2

Query: 2    IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
            +QKA +LH  M   GIQPD  TYN LI+   KEG++ + K L +DM+ + L+P  +TY+ 
Sbjct: 687  VQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDI 746

Query: 182  LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
            L+ GHC+++DF GAY WYREM E G  P V IC+ LI+GLR+EGR    D+I SEM  KG
Sbjct: 747  LIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806

Query: 362  LFDSSTAE 385
              D    E
Sbjct: 807  KDDCRADE 814



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +2

Query: 8   KAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLV 187
           + F +  +M   G++P+  +Y  LI C  K+  + EA+ +  DM ++ +VPNA  YN L+
Sbjct: 480 RCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLI 539

Query: 188 EGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL- 364
           +G C       A+ ++ EM  + + P +   N LI+GL  +G++   + + SE+  KGL 
Sbjct: 540 DGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLS 599

Query: 365 FDSST 379
           FD  T
Sbjct: 600 FDVIT 604



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/120 (32%), Positives = 64/120 (53%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +++A  L   M   G+ P  F YN +I    KE ++K+A++LFD+M ++ + PN  TYNT
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L++G+C+V     A+     M  + V P +   N L++GL     +E    +  EM   G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/116 (34%), Positives = 59/116 (50%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++ AF    +M+   I P   TYN LI    K+GKV EA+ L  ++  K L  +  TYN+
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEM 349
           L+ G+    +   A   Y  M + G+ P +   + LI+G   EG L  V+ IY EM
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEM 662



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/111 (33%), Positives = 55/111 (49%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           M+  G+ P+   YN LI      GK+K+A   FD+M  +E+VP   TYN L+ G C+   
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGK 582

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
              A     E++ KG+   V   N LISG    G ++    +Y  M+  G+
Sbjct: 583 VMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLI--MCRLKEGKVKEAKELFDDMRNKELVPNADTY 175
           I KA+    +M   G++P+  TYNSL+   C +K   ++EA++    M  K ++PN +TY
Sbjct: 408 INKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKN--MEEAEKCIKKMVEKGVLPNVETY 465

Query: 176 NTLVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRG 355
           NTL++G+ R   F   +    EM +KG+ P V     LI+ L  +  +   ++I  +M  
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVH 525

Query: 356 KGL 364
           +G+
Sbjct: 526 RGV 528



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           +QKA  L+  M   GI+P   TY+ LI    KEG V   K ++ +M    LVP+   YN 
Sbjct: 618 VQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK-IYQEMLQMNLVPDRVIYNA 676

Query: 182 LVEGHCRVE--DFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRG 355
           L+  HC VE  D   A   +  M  +G+ P     N LI G   EGR+  V  + ++M+ 
Sbjct: 677 LI--HCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKI 734

Query: 356 KGL 364
           +GL
Sbjct: 735 RGL 737



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/121 (28%), Positives = 59/121 (48%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++KA  +  + +++G+ P    +N+++    + G + +A    + M    L PN  TYN+
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           LV+  C +++   A    ++M EKGV P V   N LI G       +    I  EM  KG
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492

Query: 362 L 364
           L
Sbjct: 493 L 493


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
            mitochondrial-like [Glycine max]
          Length = 777

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/121 (52%), Positives = 84/121 (69%)
 Frame = +2

Query: 2    IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
            + KA +LH QM+D G+  D  TYNSLI+  L++ +V E K L DDM+ K LVP  DTYN 
Sbjct: 655  VMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNI 714

Query: 182  LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
            L++G C ++DF+GAYFWYREM E+G+   V +C +LISGLR+EG L    I+ SE+   G
Sbjct: 715  LIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGG 774

Query: 362  L 364
            L
Sbjct: 775  L 775



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/120 (34%), Positives = 66/120 (55%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           + K F L   M+  G+ P  F YN ++    K  ++K+A++LFD+M  + +VPN  TYNT
Sbjct: 173 LDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNT 232

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L++G+C+V     A  +   M E+ V   +   N L++GL   GR++    +  EM G G
Sbjct: 233 LIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSG 292



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/118 (32%), Positives = 66/118 (55%)
 Frame = +2

Query: 8   KAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLV 187
           + F    +M   GI+P+  +Y SLI C  K+ K+ +A+ +  DM  + + PNA+ YN L+
Sbjct: 448 RCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507

Query: 188 EGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           E  C +     A+ ++ EM + G+   +   N LI+GL   GR++  + ++ +M GKG
Sbjct: 508 EASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/121 (32%), Positives = 60/121 (49%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           I+KA  +  +++++G+ P   +YN L+    +EG VK+A    + M  + L PN  T+NT
Sbjct: 341 IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNT 400

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           ++   C   +   A  W R M EKGV P V   N LI+G   +G          EM   G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 362 L 364
           +
Sbjct: 461 I 461



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/116 (33%), Positives = 61/116 (52%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++ AF    +MI  GI     TYN+LI    + G+VK+A++LF  M  K   P+  TYN+
Sbjct: 516 LKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNS 575

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEM 349
           L+ G+ +  +       Y +M   G+ P VG  + LI   R EG +  +D ++ EM
Sbjct: 576 LISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG-VVTMDKMFQEM 630



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/121 (28%), Positives = 65/121 (53%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           ++KA     QM + G++P+  T+N++I    + G+V  A+     M  K + P  +TYN+
Sbjct: 376 VKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNS 435

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L+ G+ +   F   + +  EM + G+ P V     LI+ L  + +L   +I+ ++M G+G
Sbjct: 436 LINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRG 495

Query: 362 L 364
           +
Sbjct: 496 V 496


>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g12100, mitochondrial; Flags: Precursor
            gi|9759377|dbj|BAB10028.1| unnamed protein product
            [Arabidopsis thaliana] gi|28973713|gb|AAO64173.1| unknown
            protein [Arabidopsis thaliana] gi|29824237|gb|AAP04079.1|
            unknown protein [Arabidopsis thaliana]
            gi|110737169|dbj|BAF00534.1| hypothetical protein
            [Arabidopsis thaliana] gi|332004380|gb|AED91763.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 816

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/128 (50%), Positives = 86/128 (67%)
 Frame = +2

Query: 2    IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
            ++KAF L  QMI+  I  D  TYNSLI+ +LK GK+ E + L D+M  +E+ P ADTYN 
Sbjct: 681  MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740

Query: 182  LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
            +V+GHC V+D+  AY WYREM EKG    V I NEL+SGL++E R +  +I+ SEM G+ 
Sbjct: 741  IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800

Query: 362  LFDSSTAE 385
            L D +  E
Sbjct: 801  LGDVTVDE 808



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/119 (31%), Positives = 62/119 (52%)
 Frame = +2

Query: 8   KAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLV 187
           K F +  +M D+G  P+  +Y +LI C  K  K+ EA+ +  DM ++ + P    YN L+
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536

Query: 188 EGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
           +G C       A+ + +EM +KG+   +   N LI GL   G+L   + +  E+  KGL
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/123 (30%), Positives = 66/123 (53%)
 Frame = +2

Query: 5   QKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTL 184
           + A  ++   +D G++ + +T + L+    KEGK+++A+E+      K LVPN   YNT+
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395

Query: 185 VEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
           ++G+CR  D  GA      M ++G+ P     N LI    + G +E  +   ++M+ KG+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455

Query: 365 FDS 373
             S
Sbjct: 456 SPS 458



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/120 (30%), Positives = 61/120 (50%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           + K   L  +M    I P  F YN LI    K  ++ +A++LFD+M  + L+P+  TYNT
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKG 361
           L++G+C+  +   ++     M    + P +   N L+ GL   G +E  + +  EM+  G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/111 (34%), Positives = 54/111 (48%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           M D G+ P    YN LI     +GK+++A     +M  K +  N  TYNTL++G      
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
            S A     E+S KG+ P V   N LISG    G ++    +Y EM+  G+
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 61/120 (50%)
 Frame = +2

Query: 5   QKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTL 184
           +K+F +  +M    I+P   T+N+L+    K G V++A+ +  +M++   VP+A T++ L
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325

Query: 185 VEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
            +G+   E    A   Y    + GV      C+ L++ L  EG++E  + I      KGL
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/116 (31%), Positives = 60/116 (51%)
 Frame = +2

Query: 2   IQKAFALHYQMIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNT 181
           I+ AF    +M+  GI+ +  TYN+LI      GK+ EA++L  ++  K L P+  TYN+
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604

Query: 182 LVEGHCRVEDFSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEM 349
           L+ G+    +       Y EM   G+ P +   + LIS    EG +E  + ++ EM
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM 659



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/111 (28%), Positives = 57/111 (51%)
 Frame = +2

Query: 32  MIDHGIQPDCFTYNSLIMCRLKEGKVKEAKELFDDMRNKELVPNADTYNTLVEGHCRVED 211
           M   G++PD   YN LI    + G+++ A++  + M+ K + P+ +TYN L+ G+ R  +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474

Query: 212 FSGAYFWYREMSEKGVFPGVGICNELISGLRDEGRLEYVDIIYSEMRGKGL 364
           F   +   +EM + G  P V     LI+ L    +L    I+  +M  +G+
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525