BLASTX nr result

ID: Cnidium21_contig00048028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00048028
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003890124.1| hypothetical protein PGTG_21261 [Puccinia gr...    55   4e-06
ref|XP_002309267.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_003890124.1| hypothetical protein PGTG_21261 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3] gi|375165313|gb|EHS62889.1|
           hypothetical protein PGTG_21261 [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 339

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
 Frame = -3

Query: 305 FQLVHCWTILRNCPKFAATFQK-----KTQKSPNDSPKS--SASAESQFNNKPSQDSEER 147
           F L HCW ILR  PK+ AT Q+     K  K P+++P +  +A + SQ + +P ++ E+ 
Sbjct: 186 FNLDHCWAILREHPKWQATQQEIDLKAKKSKQPSNTPTTDDTAQSSSQADTQPDEEDEQS 245

Query: 146 M-------ERPMGRKAAKRLKRTEHEAKADDFITVITQAKDTMSRLSESRNETIR 3
                    RP G KAAKR KR E     D  +  I + ++ + ++S+ R+ +++
Sbjct: 246 TRSALGSESRPEGNKAAKR-KRDE-----DAMLEKIIRTQEELVKISKERSASVQ 294


>ref|XP_002309267.1| predicted protein [Populus trichocarpa] gi|222855243|gb|EEE92790.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
 Frame = -3

Query: 311 KAFQLVHCWTILRNCPKF----AATFQK--KTQKSPNDSPKSSASAESQFNNKPSQDSEE 150
           K FQL HCW ILR  PK+    A+ +Q+  K QKS  ++  +S++  +  +    +DSE 
Sbjct: 20  KRFQLEHCWVILRKEPKWQFERASQYQRSNKKQKSHVNASPASSTPSTPDSVSLGEDSEP 79

Query: 149 RM--ERPMGRKAAK-RLKRTEHEAKADD--FITVITQAKDTMSRLSESR 18
            +  +RP+G+KAAK RLKR + + K  +     ++ Q KDT+  + + +
Sbjct: 80  LIYQDRPIGQKAAKERLKRRQGKDKVGEVTVTNLLQQFKDTLVEIEDQK 128


Top