BLASTX nr result
ID: Cnidium21_contig00048005
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00048005 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 74 1e-11 ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355... 72 6e-11 emb|CAB75484.1| putative protein [Arabidopsis thaliana] 70 1e-10 ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 70 2e-10 gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 70 2e-10 >ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 1723 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%) Frame = +2 Query: 8 IPPKVKNFV*RVLLNCLPTLDNLQKRHVEVNSQCPVCQAGDESIDHVLWGCSFSSRCWER 187 +PPKVK F+ R N LPT LQ R V C +C+ DE H+ + C+ S +CW++ Sbjct: 1425 VPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQ 1484 Query: 188 SGLDTN-DFEGQVSLQILAKMYDNWANKDSE---LLCMIVWSLWSHRNAVVWR 334 GL + + Q++L M++ DS + ++WS+W RN +WR Sbjct: 1485 LGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWR 1537 >ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1| Cytochrome P450 [Medicago truncatula] Length = 687 Score = 71.6 bits (174), Expect = 6e-11 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 4/112 (3%) Frame = +2 Query: 8 IPPKVKNFV*RVLLNCLPTLDNLQKRHVEVNSQCPVCQAGDESIDHVLWGCSFSSRCWER 187 +PPKVKNF+ R NCLPT LQ + V+ +C VC E +H+ + CS S W+R Sbjct: 374 LPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQR 433 Query: 188 SGLDT---NDFEGQVSLQI-LAKMYDNWANKDSELLCMIVWSLWSHRNAVVW 331 GL + F+ VS + + + + ++ + +WS+W HRN VW Sbjct: 434 IGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVW 485 >emb|CAB75484.1| putative protein [Arabidopsis thaliana] Length = 851 Score = 70.5 bits (171), Expect = 1e-10 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%) Frame = +2 Query: 8 IPPKVKNFV*RVLLNCLPTLDNLQKRHVEVNSQCPVCQAGDESIDHVLWGCSFSSRCWE- 184 I PK+K+F+ R+L LPT D L R + ++ CP C+ +ESI+H L+ C F++ W Sbjct: 672 IMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRL 731 Query: 185 ------RSGLDTNDFEGQVSLQILAKMYDNWANKDSELLC--MIVWSLWSHRNAVVW 331 RS + +N+ E +S +L + N DS+ L ++W +W RN VV+ Sbjct: 732 SDTPLYRSSILSNNIEDNISNILL--LLQNTTITDSQKLIPFWLLWRIWKARNNVVF 786 >ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana] gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR reverse transcriptase [Arabidopsis thaliana] gi|332641254|gb|AEE74775.1| RNase H domain-containing protein [Arabidopsis thaliana] Length = 484 Score = 70.1 bits (170), Expect = 2e-10 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Frame = +2 Query: 8 IPPKVKNFV*RVLLNCLPTLDNLQKRHVEVNSQCPVCQAGDESIDHVLWGCSFSSRCWE- 184 I PK+K+F+ R L L T + L R + ++ CP C +ESI+H L+ C F++ W Sbjct: 167 IMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRL 226 Query: 185 ------RSGLDTNDFEGQVSLQILAKMYDNWANKDSELL-CMIVWSLWSHRNAVVWRK 337 R+ L +NDFE +S IL + D + +LL ++W +W RN VV+ K Sbjct: 227 SDSSLIRNQLMSNDFEENIS-NILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNK 283 >gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1750 Score = 70.1 bits (170), Expect = 2e-10 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Frame = +2 Query: 8 IPPKVKNFV*RVLLNCLPTLDNLQKRHVEVNSQCPVCQAGDESIDHVLWGCSFSSRCWE- 184 I PK+K+F+ R L L T + L R + ++ CP C +ESI+H L+ C F++ W Sbjct: 1433 IMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRL 1492 Query: 185 ------RSGLDTNDFEGQVSLQILAKMYDNWANKDSELL-CMIVWSLWSHRNAVVWRK 337 R+ L +NDFE +S IL + D + +LL ++W +W RN VV+ K Sbjct: 1493 SDSSLIRNQLMSNDFEENIS-NILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNK 1549