BLASTX nr result

ID: Cnidium21_contig00047993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047993
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
emb|CBI40653.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43

>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/102 (85%), Positives = 93/102 (91%)
 Frame = -2

Query: 431 ETLLDDIKAAGYVPDTSSIHDVEDDVHEQLLKTHSEKLAIAFGLLNSGPGTTIHIRKNLR 252
           ETL+D+I+AAGYVPDT+SIHDVEDDV  QLL THSEKLAIAFGLLN+  GT IHIRKNLR
Sbjct: 603 ETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLR 662

Query: 251 VCTDCHNATKYISLVTRREIIVRDMHRFHHFKDGMCSCGDYW 126
           VC DCHNATKYISLVT REIIVRDMHRFH FKDG+CSCGDYW
Sbjct: 663 VCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704


>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = -2

Query: 431 ETLLDDIKAAGYVPDTSSIHDVEDDVHEQLLKTHSEKLAIAFGLLNSGPGTTIHIRKNLR 252
           ETL + IKAAGY+PDT+S+HDVED V EQLL +HSEKLAIAF LLN+ PGTTIH+RKNLR
Sbjct: 496 ETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLR 555

Query: 251 VCTDCHNATKYISLVTRREIIVRDMHRFHHFKDGMCSCGDYW 126
           VC DCHNATKYISLVT+REIIVRDM RFHHFKDG CSCGDYW
Sbjct: 556 VCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 597


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = -2

Query: 431  ETLLDDIKAAGYVPDTSSIHDVEDDVHEQLLKTHSEKLAIAFGLLNSGPGTTIHIRKNLR 252
            ETL + IKAAGY+PDT+S+HDVED V EQLL +HSEKLAIAF LLN+ PGTTIH+RKNLR
Sbjct: 748  ETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLR 807

Query: 251  VCTDCHNATKYISLVTRREIIVRDMHRFHHFKDGMCSCGDYW 126
            VC DCHNATKYISLVT+REIIVRDM RFHHFKDG CSCGDYW
Sbjct: 808  VCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = -2

Query: 431  ETLLDDIKAAGYVPDTSSIHDVEDDVHEQLLKTHSEKLAIAFGLLNSGPGTTIHIRKNLR 252
            E L+ +IKAAGYVPDT+ I DVEDDV EQLL +HSEKLAIAFGLLN+ PGTTIH+RKNLR
Sbjct: 720  EELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLR 779

Query: 251  VCTDCHNATKYISLVTRREIIVRDMHRFHHFKDGMCSCGDYW 126
            VC DCHNATKYISLVT REIIVRDM RFHHFK+G+CSCGDYW
Sbjct: 780  VCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Cucumis sativus]
          Length = 821

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/102 (82%), Positives = 92/102 (90%)
 Frame = -2

Query: 431  ETLLDDIKAAGYVPDTSSIHDVEDDVHEQLLKTHSEKLAIAFGLLNSGPGTTIHIRKNLR 252
            E L+ +IKAAGYVPDT+ I DVEDDV EQLL +HSEKLAIAFGLLN+ PGTTIH+RKNLR
Sbjct: 720  EELVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLR 779

Query: 251  VCTDCHNATKYISLVTRREIIVRDMHRFHHFKDGMCSCGDYW 126
            VC DCHNATKYISLVT REIIVRDM RFHHFK+G+CSCGDYW
Sbjct: 780  VCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


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