BLASTX nr result

ID: Cnidium21_contig00047988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047988
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266...   117   1e-24
emb|CBI25059.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus c...   104   8e-21
ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_004145416.1| PREDICTED: uncharacterized protein LOC101210...    97   1e-18

>ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266517 [Vitis vinifera]
          Length = 800

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 22/130 (16%)
 Frame = +1

Query: 10  NSNDKKLKVKQQSH----ISSNVIKDNN-----------VDPFDKSC----VRSDE---M 123
           + N+ +LK  QQS+    ISSNVI+DN            +DP+        V+++    +
Sbjct: 229 DGNNFQLKQSQQSNLGSSISSNVIRDNASIGHRASNGRALDPYPMEYPVRNVKAEPPRAL 288

Query: 124 LRGCSKRNFKSPQQRKSFYNPADIFPEPNQKLSIYGEIERRLKMRGIDEPMKDLETLKQI 303
            RG     +KSPQQRKSF++  D FPEP Q +SIYGEIERRLKMRGIDEP KDLETLKQI
Sbjct: 289 QRGLGSSQWKSPQQRKSFFDSEDFFPEPKQTVSIYGEIERRLKMRGIDEPAKDLETLKQI 348

Query: 304 LEAMQLKGLL 333
           LEA+QLKGLL
Sbjct: 349 LEALQLKGLL 358


>emb|CBI25059.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  117 bits (292), Expect = 1e-24
 Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 22/130 (16%)
 Frame = +1

Query: 10  NSNDKKLKVKQQSH----ISSNVIKDNN-----------VDPFDKSC----VRSDE---M 123
           + N+ +LK  QQS+    ISSNVI+DN            +DP+        V+++    +
Sbjct: 229 DGNNFQLKQSQQSNLGSSISSNVIRDNASIGHRASNGRALDPYPMEYPVRNVKAEPPRAL 288

Query: 124 LRGCSKRNFKSPQQRKSFYNPADIFPEPNQKLSIYGEIERRLKMRGIDEPMKDLETLKQI 303
            RG     +KSPQQRKSF++  D FPEP Q +SIYGEIERRLKMRGIDEP KDLETLKQI
Sbjct: 289 QRGLGSSQWKSPQQRKSFFDSEDFFPEPKQTVSIYGEIERRLKMRGIDEPAKDLETLKQI 348

Query: 304 LEAMQLKGLL 333
           LEA+QLKGLL
Sbjct: 349 LEALQLKGLL 358


>ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus communis]
           gi|223539804|gb|EEF41384.1| hypothetical protein
           RCOM_0991200 [Ricinus communis]
          Length = 773

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 6/110 (5%)
 Frame = +1

Query: 22  KKLKVKQQSHISSNVIKD---NN---VDPFDKSCVRSDEMLRGCSKRNFKSPQQRKSFYN 183
           K+ + +Q     SNVIKD   NN   +DP + + +R+  +    ++   +   QRKSF++
Sbjct: 237 KQTQQQQNDSTHSNVIKDQTTNNTRAMDPKENNAMRN--VRAEPARMAHRGIGQRKSFFD 294

Query: 184 PADIFPEPNQKLSIYGEIERRLKMRGIDEPMKDLETLKQILEAMQLKGLL 333
            AD FPEP Q +SIYGEIE+RLKMRGIDEP KDLETLKQILEA+QLKGLL
Sbjct: 295 SADFFPEPKQTVSIYGEIEKRLKMRGIDEPSKDLETLKQILEALQLKGLL 344


>ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|222843808|gb|EEE81355.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/103 (54%), Positives = 70/103 (67%), Gaps = 5/103 (4%)
 Frame = +1

Query: 40  QQSHISSNVIKDNN-----VDPFDKSCVRSDEMLRGCSKRNFKSPQQRKSFYNPADIFPE 204
           +QS++SS   KD       VDP   + VR+       ++   +   QRKSF++ AD FPE
Sbjct: 244 KQSNVSSKGAKDQKLNGRTVDPKAYNVVRNARAEP--ARAQHRGIGQRKSFFDSADFFPE 301

Query: 205 PNQKLSIYGEIERRLKMRGIDEPMKDLETLKQILEAMQLKGLL 333
           P Q +SIYGEIE+RL+MRGIDEP KDLETLK ILEA+QLKGLL
Sbjct: 302 PKQTVSIYGEIEKRLRMRGIDEPSKDLETLKHILEALQLKGLL 344


>ref|XP_004145416.1| PREDICTED: uncharacterized protein LOC101210692 [Cucumis sativus]
           gi|449470997|ref|XP_004153178.1| PREDICTED:
           uncharacterized protein LOC101215490 [Cucumis sativus]
          Length = 803

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/124 (49%), Positives = 75/124 (60%), Gaps = 13/124 (10%)
 Frame = +1

Query: 1   VDSNSNDKKLKVKQQSHISS------NVIKDNNVDPFDKSCV----RSDEMLRGCSKRNF 150
           +D N+     ++KQ  H+SS      NV+  N  +    S V    RSD   R       
Sbjct: 227 IDGNN----FRLKQSQHLSSQDNNGSNVLIKNAANMDHSSNVKMLDRSDFAARSTKAEPV 282

Query: 151 KSPQ---QRKSFYNPADIFPEPNQKLSIYGEIERRLKMRGIDEPMKDLETLKQILEAMQL 321
           +S +    RK F++  D+FPEP Q  SIYGEIE+RLKMRGIDEP KDLETLKQILEA+QL
Sbjct: 283 RSQRGIGPRKIFFDSGDVFPEPKQPASIYGEIEKRLKMRGIDEPSKDLETLKQILEALQL 342

Query: 322 KGLL 333
           KGLL
Sbjct: 343 KGLL 346


Top