BLASTX nr result

ID: Cnidium21_contig00047957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047957
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317344.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-09
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...    65   1e-09
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...    65   1e-09
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...    65   1e-09
emb|CBI30994.3| unnamed protein product [Vitis vinifera]               65   2e-09

>ref|XP_002317344.1| predicted protein [Populus trichocarpa] gi|222860409|gb|EEE97956.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -1

Query: 94  AHGTTHYGRNF*VKWLKLCEPSFHKTRHLRN 2
           AHGT HYGRNF VKWLKLCE SFHKTRHLRN
Sbjct: 375 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 405



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 122 GCAKMTSKL 96
           GCAKMTSK+
Sbjct: 355 GCAKMTSKI 363


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -1

Query: 94  AHGTTHYGRNF*VKWLKLCEPSFHKTRHLRN 2
           AHGT HYGRNF VKWLKLCE SFHKTRHLRN
Sbjct: 345 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 375



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 122 GCAKMTSKL 96
           GCAKMTSK+
Sbjct: 325 GCAKMTSKI 333


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 681

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -1

Query: 94  AHGTTHYGRNF*VKWLKLCEPSFHKTRHLRN 2
           AHGT HYGRNF VKWLKLCE SFHKTRHLRN
Sbjct: 335 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 365



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 122 GCAKMTSKL 96
           GCAKMTSK+
Sbjct: 315 GCAKMTSKI 323


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score = 65.1 bits (157), Expect(2) = 1e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -1

Query: 94  AHGTTHYGRNF*VKWLKLCEPSFHKTRHLRN 2
           AHGT HYGRNF VKWLKLCE SFHKTRHLRN
Sbjct: 323 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 353



 Score = 21.9 bits (45), Expect(2) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 122 GCAKMTSKL 96
           GCAKMTSK+
Sbjct: 303 GCAKMTSKI 311


>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score = 65.1 bits (157), Expect(2) = 2e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -1

Query: 94  AHGTTHYGRNF*VKWLKLCEPSFHKTRHLRN 2
           AHGT HYGRNF VKWLKLCE SFHKTRHLRN
Sbjct: 250 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRN 280



 Score = 21.9 bits (45), Expect(2) = 2e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 122 GCAKMTSKL 96
           GCAKMTSK+
Sbjct: 230 GCAKMTSKI 238


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