BLASTX nr result

ID: Cnidium21_contig00047946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047946
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   186   6e-63
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   189   2e-62
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   189   2e-62
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   182   5e-62
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   182   1e-61

>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  186 bits (471), Expect(2) = 6e-63
 Identities = 86/118 (72%), Positives = 102/118 (86%)
 Frame = -2

Query: 355  ERLKARLVVFGHRQVPGIDFNETFAPVAKMVTVRTFLANAVARDWEIHQMDVHNAFLHGD 176
            ERLK+RLVV G+ Q  GID++ETF+PVAKM TVRTFLA A +++WE+HQMDVHNAFLHGD
Sbjct: 1010 ERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIAASKNWELHQMDVHNAFLHGD 1069

Query: 175  LDEEIYMQLPPGFKSSSPGKVCRLRKSLYGLRQAPRNWFAKLSRALKSFGFKQSYADY 2
            L+EE+YM+LPPGF+ S P  VCRLRKSLYGL+QAPR WFAKL  ALK +GF QSY+DY
Sbjct: 1070 LEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDY 1127



 Score = 80.5 bits (197), Expect(2) = 6e-63
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = -3

Query: 534  DPTTFKEAVKDPGWCTAMQEEIDALERNNTWTLEDLPPGKKAIGCK*VYRTKYRSDGTTE 355
            DP +FKEA+KD GW  +M EEI ALE N TWTLE LP GK+A+G + VYRTKY S+G  E
Sbjct: 951  DPKSFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIE 1010


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  189 bits (479), Expect(2) = 2e-62
 Identities = 88/118 (74%), Positives = 100/118 (84%)
 Frame = -2

Query: 355  ERLKARLVVFGHRQVPGIDFNETFAPVAKMVTVRTFLANAVARDWEIHQMDVHNAFLHGD 176
            ER KARLVV G+ Q  G+DF ETFAPVAK+ TVRT LA A A+DWE+HQMDVHNAFLHGD
Sbjct: 1045 ERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGD 1104

Query: 175  LDEEIYMQLPPGFKSSSPGKVCRLRKSLYGLRQAPRNWFAKLSRALKSFGFKQSYADY 2
            L+EE+YM+LPPGFK S P KVCRLRKSLYGL+QAPR WF+KLS AL++ GF QSY DY
Sbjct: 1105 LEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDY 1162



 Score = 75.9 bits (185), Expect(2) = 2e-62
 Identities = 35/60 (58%), Positives = 42/60 (70%)
 Frame = -3

Query: 534  DPTTFKEAVKDPGWCTAMQEEIDALERNNTWTLEDLPPGKKAIGCK*VYRTKYRSDGTTE 355
            +P  FK+A+    WC AM +EIDALE N+TW + DLP GKKAI  K VY+ KY SDGT E
Sbjct: 986  EPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLE 1045


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
           At2g23330 [Arabidopsis thaliana]
           gi|110742535|dbj|BAE99183.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  189 bits (479), Expect(2) = 2e-62
 Identities = 88/118 (74%), Positives = 100/118 (84%)
 Frame = -2

Query: 355 ERLKARLVVFGHRQVPGIDFNETFAPVAKMVTVRTFLANAVARDWEIHQMDVHNAFLHGD 176
           ER KARLVV G+ Q  G+DF ETFAPVAK+ TVRT LA A A+DWE+HQMDVHNAFLHGD
Sbjct: 325 ERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGD 384

Query: 175 LDEEIYMQLPPGFKSSSPGKVCRLRKSLYGLRQAPRNWFAKLSRALKSFGFKQSYADY 2
           L+EE+YM+LPPGFK S P KVCRLRKSLYGL+QAPR WF+KLS AL++ GF QSY DY
Sbjct: 385 LEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDY 442



 Score = 75.9 bits (185), Expect(2) = 2e-62
 Identities = 35/60 (58%), Positives = 42/60 (70%)
 Frame = -3

Query: 534 DPTTFKEAVKDPGWCTAMQEEIDALERNNTWTLEDLPPGKKAIGCK*VYRTKYRSDGTTE 355
           +P  FK+A+    WC AM +EIDALE N+TW + DLP GKKAI  K VY+ KY SDGT E
Sbjct: 266 EPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLE 325


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  182 bits (463), Expect(2) = 5e-62
 Identities = 84/118 (71%), Positives = 101/118 (85%)
 Frame = -2

Query: 355  ERLKARLVVFGHRQVPGIDFNETFAPVAKMVTVRTFLANAVARDWEIHQMDVHNAFLHGD 176
            ERLK+RLVV G+ Q  GID++ETF+PVAKM TVR FLA A +++WE+HQMDVHNAFLHGD
Sbjct: 727  ERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGD 786

Query: 175  LDEEIYMQLPPGFKSSSPGKVCRLRKSLYGLRQAPRNWFAKLSRALKSFGFKQSYADY 2
            L+EE+YM+LPPGF+ S P  VCRLRKSLYGL+QAPR WF+KL  ALK +GF QSY+DY
Sbjct: 787  LEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDY 844



 Score = 80.5 bits (197), Expect(2) = 5e-62
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = -3

Query: 534 DPTTFKEAVKDPGWCTAMQEEIDALERNNTWTLEDLPPGKKAIGCK*VYRTKYRSDGTTE 355
           DP +FKEA+KD GW  +M EEI ALE N TWTLE LP GK+A+G + VYRTKY S+G  E
Sbjct: 668 DPKSFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIE 727


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  182 bits (463), Expect(2) = 1e-61
 Identities = 85/118 (72%), Positives = 101/118 (85%)
 Frame = -2

Query: 355  ERLKARLVVFGHRQVPGIDFNETFAPVAKMVTVRTFLANAVARDWEIHQMDVHNAFLHGD 176
            ERLK+RLVV G+ Q  GID++ETF+PVAKM TVR FLA A +++WE+HQMDVHNAFLHGD
Sbjct: 678  ERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGD 737

Query: 175  LDEEIYMQLPPGFKSSSPGKVCRLRKSLYGLRQAPRNWFAKLSRALKSFGFKQSYADY 2
            L+EE+YM+LPPGF+SS P  VCRL KSLYGL+QAPR WFAKL  ALK +GF QSY+DY
Sbjct: 738  LEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDY 795



 Score = 79.0 bits (193), Expect(2) = 1e-61
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -3

Query: 534 DPTTFKEAVKDPGWCTAMQEEIDALERNNTWTLEDLPPGKKAIGCK*VYRTKYRSDGTTE 355
           DP +FKEA+KD GW  +M EEI ALE N  WTLE LP GK+A+G + VYRTKY S+G  E
Sbjct: 619 DPKSFKEAMKDVGWQKSMHEEIQALEENGMWTLEPLPKGKRALGSQWVYRTKYFSNGDIE 678


Top