BLASTX nr result

ID: Cnidium21_contig00047924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047924
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    89   7e-19
ref|XP_003549315.1| PREDICTED: uncharacterized protein LOC100779...    83   7e-18
ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...    84   9e-18
gb|AAT01370.1| putative non-LTR retroelement reverse transcripta...    76   2e-17
emb|CAN74005.1| hypothetical protein VITISV_006236 [Vitis vinifera]    75   2e-17

>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 89.0 bits (219), Expect(2) = 7e-19
 Identities = 41/73 (56%), Positives = 54/73 (73%)
 Frame = +2

Query: 113  VMKEMNFDSKWILWIRSIFESAKISVLVNGSPSTEFTPKRGLRQGDPLSPLLFNLVGESL 292
            +++ M F SKWI WI    +SA ISVLVNGSP++EF+P+RGLRQGDPL+PLLFN+  E L
Sbjct: 1971 MLRRMGFCSKWIQWIHGCLKSASISVLVNGSPTSEFSPQRGLRQGDPLAPLLFNITAEGL 2030

Query: 293  SSLLHIANREGIF 331
            + L+  A  +  F
Sbjct: 2031 TGLMREAVNKNHF 2043



 Score = 29.6 bits (65), Expect(2) = 7e-19
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 1    QMSDSILITSEVFSALNKKKSRGVILKIDFEKAFDSRGYE 120
            Q+  S++  +EV     + +   ++ K+DFE+A+DS  ++
Sbjct: 1927 QLLHSVITVNEVVEEAKRGRKPCLVFKVDFERAYDSVSWD 1966


>ref|XP_003549315.1| PREDICTED: uncharacterized protein LOC100779829 [Glycine max]
          Length = 2586

 Score = 83.2 bits (204), Expect(2) = 7e-18
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = +2

Query: 98   HSTQEVMKEMNFDSKWILWIRSIFESAKISVLVNGSPSTEFTPKRGLRQGDPLSPLLFNL 277
            H    +++ M F  +WI WIR+    A IS+LVNGSP++EF P+RGLRQGDPL+PLLF+L
Sbjct: 898  HFLLYMLRRMGFHERWIRWIRACLTLASISILVNGSPTSEFKPQRGLRQGDPLAPLLFDL 957

Query: 278  VGESLSS 298
            V E L++
Sbjct: 958  VAEGLTA 964



 Score = 32.0 bits (71), Expect(2) = 7e-18
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 1   QMSDSILITSEVFSALNKKKSRGVILKIDFEKAFDS 108
           Q+   +L+ +EV     + K   ++ K+DFEKA++S
Sbjct: 859 QLLHGVLVANEVIEEARRSKKSCMVFKVDFEKAYNS 894


>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score = 84.0 bits (206), Expect(2) = 9e-18
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = +2

Query: 113  VMKEMNFDSKWILWIRSIFESAKISVLVNGSPSTEFTPKRGLRQGDPLSPLLFNLVGESL 292
            ++K   F  KWI W+    +SA ISVLVNGSP+ EF P+RGLRQGDPL+P LFN+V E+L
Sbjct: 1260 MLKRTGFCPKWISWMEGCLKSASISVLVNGSPTKEFKPQRGLRQGDPLAPFLFNIVAEAL 1319

Query: 293  SSLLHIA 313
            + L+  A
Sbjct: 1320 NGLMRTA 1326



 Score = 30.8 bits (68), Expect(2) = 9e-18
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 13   SILITSEVFSALNKKKSRGVILKIDFEKAFDS 108
            S+LI +EV     +     +I K+D+EKA+DS
Sbjct: 1220 SVLIANEVIDEAKRSHKPCLIFKVDYEKAYDS 1251


>gb|AAT01370.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1614

 Score = 76.3 bits (186), Expect(2) = 2e-17
 Identities = 34/73 (46%), Positives = 49/73 (67%)
 Frame = +2

Query: 110  EVMKEMNFDSKWILWIRSIFESAKISVLVNGSPSTEFTPKRGLRQGDPLSPLLFNLVGES 289
            EVM    F SKW+ WI++     ++ + +NG  +  F   RGLRQGDPLSPLLFNL+ ++
Sbjct: 1218 EVMVRKGFPSKWVNWIKTCVMGGRVCININGERTDFFRTFRGLRQGDPLSPLLFNLISDA 1277

Query: 290  LSSLLHIANREGI 328
            L+++L  A REG+
Sbjct: 1278 LAAMLDSAKREGV 1290



 Score = 37.7 bits (86), Expect(2) = 2e-17
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +1

Query: 10   DSILITSEVFSALNKKKSRGVILKIDFEKAFDSRGYE 120
            +  +I  EV   +N+K   G+ILKIDFEKA+D   ++
Sbjct: 1178 EGCVIIHEVLHEMNRKNLEGIILKIDFEKAYDKVSWD 1214


>emb|CAN74005.1| hypothetical protein VITISV_006236 [Vitis vinifera]
          Length = 533

 Score = 75.1 bits (183), Expect(2) = 2e-17
 Identities = 39/71 (54%), Positives = 48/71 (67%)
 Frame = +2

Query: 113 VMKEMNFDSKWILWIRSIFESAKISVLVNGSPSTEFTPKRGLRQGDPLSPLLFNLVGESL 292
           V+++M F  KW  WIR    +A  SVL+NG P+  F   RGLRQGDPLSP LF L  E+L
Sbjct: 198 VLQKMGFGEKWADWIRWCISTASFSVLINGPPTGFFRSTRGLRQGDPLSPYLFVLGIEAL 257

Query: 293 SSLLHIANREG 325
           SSL++ A REG
Sbjct: 258 SSLINKALREG 268



 Score = 38.5 bits (88), Expect(2) = 2e-17
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +1

Query: 1   QMSDSILITSEVFSALNKKKSRGVILKIDFEKAFD 105
           Q+ D++LI +E   +L K+K  GV+ K+D EKA+D
Sbjct: 154 QILDAVLIANEAIDSLLKRKESGVLCKLDLEKAYD 188


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