BLASTX nr result

ID: Cnidium21_contig00047833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047833
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38834.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V...   108   5e-22
ref|XP_002302554.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002320104.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002510862.1| conserved hypothetical protein [Ricinus comm...    94   1e-17

>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  108 bits (270), Expect = 5e-22
 Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 19/136 (13%)
 Frame = -2

Query: 369 PAIIAATGTGTVPAIAMSVNGTLKIPTTTDNTA------CKSRKRPANIEF-ESNSTVSA 211
           PAIIAATGTGTVPAIAMSV GTLKIPTT+  T        K RKRPAN EF + N  VS 
Sbjct: 168 PAIIAATGTGTVPAIAMSVGGTLKIPTTSTATTQEPDPNKKKRKRPANSEFVDVNDAVSV 227

Query: 210 PLMISSSPTNTIQAQPLVPMYATPT-----YWMINPTNQV------PQLWTL-HAAAPLM 67
              ++   T  +  Q LVPM+A P+     +WM+ PT  +      PQ+WT    A PL+
Sbjct: 228 SSGLAPIAT-PLAPQGLVPMWAIPSNAVGAFWMVPPTTAIAGPSNQPQIWTFPPTATPLI 286

Query: 66  GVPARPISSFLASMQP 19
            + ARPISSF++SM P
Sbjct: 287 NISARPISSFVSSMHP 302


>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 360

 Score =  108 bits (270), Expect = 5e-22
 Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 19/136 (13%)
 Frame = -2

Query: 369 PAIIAATGTGTVPAIAMSVNGTLKIPTTTDNTA------CKSRKRPANIEF-ESNSTVSA 211
           PAIIAATGTGTVPAIAMSV GTLKIPTT+  T        K RKRPAN EF + N  VS 
Sbjct: 155 PAIIAATGTGTVPAIAMSVGGTLKIPTTSTATTQEPDPNKKKRKRPANSEFVDVNDAVSV 214

Query: 210 PLMISSSPTNTIQAQPLVPMYATPT-----YWMINPTNQV------PQLWTL-HAAAPLM 67
              ++   T  +  Q LVPM+A P+     +WM+ PT  +      PQ+WT    A PL+
Sbjct: 215 SSGLAPIAT-PLAPQGLVPMWAIPSNAVGAFWMVPPTTAIAGPSNQPQIWTFPPTATPLI 273

Query: 66  GVPARPISSFLASMQP 19
            + ARPISSF++SM P
Sbjct: 274 NISARPISSFVSSMHP 289


>ref|XP_002302554.1| predicted protein [Populus trichocarpa] gi|222844280|gb|EEE81827.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  106 bits (264), Expect = 2e-21
 Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 36/152 (23%)
 Frame = -2

Query: 369 PAIIAATGTGTVPAIAMSVNGTLKIPTTTDNT-------ACKSRKRPANIEF-ESNSTVS 214
           PAIIAATGTGTVPAIAMSVNGTLKIP TT+++       A K+RKRPAN E+ + N TVS
Sbjct: 134 PAIIAATGTGTVPAIAMSVNGTLKIPITTNSSSGLGQPNATKNRKRPANSEYVDVNDTVS 193

Query: 213 APLMISSSPTNTIQAQP----------------LVPMYATPT-------YWMI----NPT 115
               ++   T   Q+QP                LVPM+A P+       ++M+     P+
Sbjct: 194 VSASLAPVTTQQPQSQPQLPPQPQQTVAAVPQGLVPMWAIPSNAVVPGAFFMVPSIAGPS 253

Query: 114 NQVPQLWTLHAAA-PLMGVPARPISSFLASMQ 22
           NQ PQ++T  AAA PL+ + ARPISSF++SMQ
Sbjct: 254 NQ-PQIFTFPAAATPLINISARPISSFVSSMQ 284


>ref|XP_002320104.1| predicted protein [Populus trichocarpa] gi|222860877|gb|EEE98419.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 72/151 (47%), Positives = 90/151 (59%), Gaps = 35/151 (23%)
 Frame = -2

Query: 369 PAIIAATGTGTVPAIAMSVNGTLKIPTTTDNT-------ACKSRKRPANIEF-ESNSTVS 214
           PAIIAATGTGTVPAIAMSVNGTLKIPTTT ++       A K RKRPAN E+ + N +VS
Sbjct: 63  PAIIAATGTGTVPAIAMSVNGTLKIPTTTSSSAEPDEPNAKKKRKRPANSEYVDVNDSVS 122

Query: 213 APLMISSSPTNTIQAQP---------------LVPMYATPT-------YWMI----NPTN 112
             +  S +P  T   QP               LVPM+A P+       ++M+       N
Sbjct: 123 --VSASLAPITTRPRQPPQPQAQQPVAAVPQGLVPMWAIPSNTVVPGAFFMVPSMPGQFN 180

Query: 111 QVPQLWTLHAAA-PLMGVPARPISSFLASMQ 22
           Q PQ++T  AAA PL+ +  RPISSF++SMQ
Sbjct: 181 Q-PQIFTFPAAASPLINISPRPISSFVSSMQ 210


>ref|XP_002510862.1| conserved hypothetical protein [Ricinus communis]
           gi|223549977|gb|EEF51464.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 385

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 39/156 (25%)
 Frame = -2

Query: 369 PAIIAATGTGTVPAIAMSVNGTLKIPTTT-------DNTACKSRKRPANIEF-------- 235
           PAII ATGTGTVPAIA+S+NGTLKIPTT+       +    K RKRP+N EF        
Sbjct: 141 PAIIEATGTGTVPAIAVSINGTLKIPTTSPARPDGDETLPRKRRKRPSNSEFIDVNEHRQ 200

Query: 234 ---ESNSTVSAPLMISSSPTNTI---------QAQPLVPMYATPTYWM-----------I 124
              +  S++S+ L    SPTNT           AQ LVP +   T+ +           +
Sbjct: 201 HQQQQQSSLSSGL-APISPTNTTATLQNNNFGSAQGLVPFWPMGTFVLPQSAGLTGGVGV 259

Query: 123 NPTNQVPQLWTLHA-AAPLMGVPARPISSFLASMQP 19
             +NQ PQLW + A A P   V ARPIS+F+++MQP
Sbjct: 260 GGSNQQPQLWAIPANATPFFNVAARPISNFVSAMQP 295


Top