BLASTX nr result

ID: Cnidium21_contig00047802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047802
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141291.1| PREDICTED: pollen-specific protein SF3-like ...   102   3e-20
gb|ABB51614.1| LIM-domain protein [Brassica napus] gi|79013988|g...   101   6e-20
dbj|BAJ34608.1| unnamed protein product [Thellungiella halophila]     101   6e-20
ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti...   101   6e-20
ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|1...   100   9e-20

>ref|XP_004141291.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449508187|ref|XP_004163244.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 179

 Score =  102 bits (254), Expect = 3e-20
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 180 QVSVNKTAYHRGCFKCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGS 10
           +VSVN T+YH+ CFKC HGGCTIS +NY++H+G+ YCK+HHTQLIKEKGNLSQLEGS
Sbjct: 122 KVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 178


>gb|ABB51614.1| LIM-domain protein [Brassica napus] gi|79013988|gb|ABB51648.1| LIM
           domain protein [Brassica napus]
          Length = 189

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -2

Query: 180 QVSVNKTAYHRGCFKCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGSDD 4
           +VSVN T YH+ CFKC HGGCTIS +NY++H+GK YCK+HH QLIKEKGNLSQLEG D+
Sbjct: 122 KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGDN 180


>dbj|BAJ34608.1| unnamed protein product [Thellungiella halophila]
          Length = 189

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = -2

Query: 180 QVSVNKTAYHRGCFKCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGSDD 4
           +VSVN T YH+ CFKC HGGCTIS +NY++H+GK YCK+HH QLIKEKGNLSQLEG D+
Sbjct: 122 KVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGDN 180


>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147785329|emb|CAN72849.1| hypothetical protein
           VITISV_013939 [Vitis vinifera]
           gi|302142193|emb|CBI19396.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  101 bits (252), Expect = 6e-20
 Identities = 42/60 (70%), Positives = 53/60 (88%)
 Frame = -2

Query: 180 QVSVNKTAYHRGCFKCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEGSDDQ 1
           +V+VN TAYH+ CFKC HGGCTIS +NY++H+G+ YCK+HHTQLIKEKGNLSQLEG  ++
Sbjct: 122 KVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGDHEK 181


>ref|XP_002302405.1| predicted protein [Populus trichocarpa] gi|118483298|gb|ABK93551.1|
           unknown [Populus trichocarpa]
           gi|222844131|gb|EEE81678.1| predicted protein [Populus
           trichocarpa] gi|225626275|gb|ACN97187.1| LIM
           transcription factor [Populus trichocarpa]
          Length = 197

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/56 (75%), Positives = 51/56 (91%)
 Frame = -2

Query: 180 QVSVNKTAYHRGCFKCIHGGCTISLTNYMSHDGKPYCKYHHTQLIKEKGNLSQLEG 13
           +VSVN T+YH+ CFKCIHGGCTIS +NY++H+G+ YCK+HH QLIKEKGNLSQLEG
Sbjct: 122 KVSVNGTSYHKSCFKCIHGGCTISPSNYIAHEGRLYCKHHHNQLIKEKGNLSQLEG 177


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