BLASTX nr result
ID: Cnidium21_contig00047786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047786
(337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ... 142 2e-32
ref|NP_196831.1| pentatricopeptide repeat-containing protein [Ar... 142 3e-32
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,... 140 8e-32
ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-31
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera] 137 9e-31
>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319442|gb|EFH49864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 750
Score = 142 bits (359), Expect = 2e-32
Identities = 69/110 (62%), Positives = 81/110 (73%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
K C L+ + G+QIHA +AKLGLE VSVGTPLVDFY KC+S ESA + F I EPNDV
Sbjct: 291 KACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 350
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVAD 8
SW A+ISGYCQ + E ++TF SLR NAV+LNSF YTSI Q CS +AD
Sbjct: 351 SWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLAD 400
Score = 65.9 bits (159), Expect = 3e-09
Identities = 30/104 (28%), Positives = 62/104 (59%)
Frame = -1
Query: 319 KGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSWHALI 140
+ +++G+QIHA++ + GL + S+ T +V+ Y KC + A +VF ++ V+W L+
Sbjct: 196 RALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLM 255
Query: 139 SGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVAD 8
GY Q G + ++ F L + V +SF+++ +L+ C+++ +
Sbjct: 256 VGYTQAGRARDALKLFVDL-ITEGVEWDSFVFSVVLKACASLEE 298
Score = 59.3 bits (142), Expect = 3e-07
Identities = 33/104 (31%), Positives = 52/104 (50%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C+ L +G Q+HA K L + L+ Y+KC ++ AH+VF + P+ V+W
Sbjct: 395 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAW 454
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCS 20
A ISG+ G E +R F + S + NS + ++L CS
Sbjct: 455 TAFISGHAYYGNASEALRLFEKM-VSCGMKPNSVTFIAVLTACS 497
>ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
thaliana] gi|332004490|gb|AED91873.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 142 bits (358), Expect = 3e-32
Identities = 68/110 (61%), Positives = 82/110 (74%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
K C L+ + +G+QIHA +AKLGLE+ VSVGTPLVDFY KC+S ESA + F I EPNDV
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVAD 8
SW A+ISGYCQ + E ++TF SLR NA +LNSF YTSI Q CS +AD
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/106 (27%), Positives = 61/106 (57%)
Frame = -1
Query: 319 KGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSWHALI 140
+ ++ G+QIHA++ + GL + S+ T +V+ Y KC + A +VF ++ V+ L+
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 139 SGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
GY Q G + ++ F L + V +SF+++ +L+ C+++ + +
Sbjct: 258 VGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLEELN 302
Score = 56.6 bits (135), Expect = 2e-06
Identities = 32/104 (30%), Positives = 52/104 (50%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C+ L +G Q+HA K L + L+ Y+KC ++ A++VF + P+ V+W
Sbjct: 397 CSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAW 456
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCS 20
A ISG+ G E +R F + S + NS + ++L CS
Sbjct: 457 TAFISGHAYYGNASEALRLFEKM-VSCGMKPNSVTFIAVLTACS 499
>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 837
Score = 140 bits (354), Expect = 8e-32
Identities = 73/112 (65%), Positives = 82/112 (73%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
K C LK + G+QIH +I KLGLE+ VSVGTPLVDFY KCAS E A KVF I EPNDV
Sbjct: 300 KACAGLKELSFGRQIHGHIVKLGLESEVSVGTPLVDFYIKCASFELASKVFEGISEPNDV 359
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
SW A+I+GYCQ GE E ++ F SL RSN LNSF YTSI Q CSA+ADFS
Sbjct: 360 SWSAMITGYCQIGEFEEALKIFESL-RSNIENLNSFTYTSIFQACSALADFS 410
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/102 (27%), Positives = 55/102 (53%)
Frame = -1
Query: 307 MGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSWHALISGYC 128
+G+QIH++ + GL GVS+ T + + Y +C ++ A + E N V+W L+ GY
Sbjct: 209 IGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYT 268
Query: 127 QNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
Q G+ + F + + V L+ ++++ L+ C+ + + S
Sbjct: 269 QAGKQKNALDLFAKMVCED-VELDEYVFSISLKACAGLKELS 309
Score = 55.5 bits (132), Expect = 4e-06
Identities = 30/103 (29%), Positives = 56/103 (54%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
++C K + G+ IH + + + V + ++ Y C S+E A+KVF ++IE N +
Sbjct: 98 EICGNSKSLSDGKIIHELLRRTVEKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLI 157
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQ 29
SW +IS Y ++G + + + F S+ S + NS +Y +L+
Sbjct: 158 SWGTIISAYAEHGLLDKALSLFISM-ISLGINPNSSIYIDLLR 199
Score = 54.7 bits (130), Expect = 8e-06
Identities = 28/104 (26%), Positives = 51/104 (49%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C+ L G Q+HA K L + ++ Y++C ++ A+ F I P+ V+W
Sbjct: 403 CSALADFSTGTQVHADAIKRSLIASQHGESAMITMYSRCGRLDYANLAFETIDGPDAVAW 462
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCS 20
A+++GY G E ++ F ++ S A N+ + ++L CS
Sbjct: 463 TAIVAGYAYQGNATEALKHFWRMQGSGA-RPNAITFIAVLTACS 505
>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
predicted protein [Populus trichocarpa]
Length = 684
Score = 139 bits (349), Expect = 3e-31
Identities = 69/112 (61%), Positives = 85/112 (75%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
K C L+ + G+QIH +I KLGLE+ VSVGTPLVDFY KC+++ESA K F I EPNDV
Sbjct: 220 KACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDV 279
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
SW ALI+GYCQ GE E ++TF SL R+ +V +NSF YTSI Q CSA+ADF+
Sbjct: 280 SWSALITGYCQMGEFEEALKTFESL-RTRSVDINSFTYTSIFQACSALADFN 330
Score = 64.7 bits (156), Expect = 7e-09
Identities = 30/105 (28%), Positives = 60/105 (57%)
Frame = -1
Query: 316 GMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSWHALIS 137
G+E+G+QIH++ + GL + SV T + + Y KC +E A VF ++ E N V+W ++
Sbjct: 126 GLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMV 185
Query: 136 GYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
GY Q + + F + + V L+ ++++ +L+ C+ + + +
Sbjct: 186 GYTQAERQMDALALFAKM-VNEGVELDEYVFSIVLKACAGLEELN 229
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C+ L G Q HA K L + ++ Y++C ++ A +VF I +P+ V+W
Sbjct: 323 CSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAW 382
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCS 20
A+I+GY G E ++ F + + V N+ + ++L CS
Sbjct: 383 TAIIAGYAYQGNAPEALKLFRRM-QDCGVRPNAVTFIAVLTACS 425
>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 137 bits (345), Expect = 9e-31
Identities = 66/112 (58%), Positives = 87/112 (77%)
Frame = -1
Query: 337 KLCTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDV 158
K+C L+ +MG+QIH++I KLG E+ VSVGTPLVDFY KC +ESA++ F RI EPNDV
Sbjct: 297 KVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDV 356
Query: 157 SWHALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADFS 2
SW ALISG+ Q+G + +CI+ FTSL RS V+LNSF+YTS+ Q C+A A+ +
Sbjct: 357 SWSALISGFSQSGRLEDCIKIFTSL-RSEGVVLNSFIYTSVFQACAAQANLN 407
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/104 (31%), Positives = 53/104 (50%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C + MG Q H K GL + + + +V Y+KC ++ A + F I EP+ V+W
Sbjct: 400 CAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAW 459
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCS 20
A+ISGY +G E + F + +S V N+ + ++L CS
Sbjct: 460 TAIISGYAYHGNAAEALGFFRRM-QSYGVRPNAVTFIAVLTACS 502
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/103 (33%), Positives = 54/103 (52%)
Frame = -1
Query: 331 CTQLKGMEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSW 152
C +L+ + G+ IH + + S+ L+ Y C S KVF ++ N VSW
Sbjct: 97 CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSW 156
Query: 151 HALISGYCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCC 23
+IS Y +NGE+ + IR F+ ++ S + NS +Y S+LQ C
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQAS-GIRPNSAVYMSLLQSC 198
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/103 (26%), Positives = 56/103 (54%)
Frame = -1
Query: 313 MEMGQQIHAYIAKLGLETGVSVGTPLVDFYAKCASMESAHKVFLRIIEPNDVSWHALISG 134
+E+G+Q+H+++ + L ++V T + + Y +C +E A VF + N V+W L+ G
Sbjct: 204 LELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVG 263
Query: 133 YCQNGEVGECIRTFTSLRRSNAVLLNSFMYTSILQCCSAVADF 5
Y Q ++ + F + V L+ F+++ +L+ C + D+
Sbjct: 264 YTQAKKLEVALELFARM-AMEGVELDEFVFSIVLKVCCXLEDW 305