BLASTX nr result

ID: Cnidium21_contig00047754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047754
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re...   139   2e-31
ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]...   133   2e-29
ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]...   132   3e-29
ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...   132   4e-29
ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glyc...   131   6e-29

>ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like
           [Glycine max]
          Length = 823

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 6/143 (4%)
 Frame = -3

Query: 411 YDALVGDITIRADREEKVDFSLPYMESGVVMVVKAEPDRLKNMWIFLKPLSWDLWLMIVL 232
           YDA+VGD+TI A R E VDF++P+ ESGV M+V A+ D  +N+WIFLKP +WDLWL    
Sbjct: 439 YDAVVGDVTIVAKRSEYVDFTMPFSESGVAMLVLAKHDERQNIWIFLKPFNWDLWLTTGA 498

Query: 231 ASIFIGLVLRMLERRVN------PQRQLGMXXXXXXXXXXXPEKNMVRNKWARFVLVVWL 70
           A IF G ++   E R N      P+ Q+GM             +  V NKW+RFVL++W 
Sbjct: 499 AFIFTGFIVWFFEHRSNTEFRGTPKNQIGMALWFSFSTLVFAHREKVENKWSRFVLIIWF 558

Query: 69  FMAYILMQSYTANLSSILTVGQL 1
           F+  I+ QSYTA+L+SILTV +L
Sbjct: 559 FVVLIITQSYTASLASILTVQKL 581


>ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]
            gi|355492303|gb|AES73506.1| Glutamate receptor 2.8
            [Medicago truncatula]
          Length = 1057

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
 Frame = -3

Query: 411  YDALVGDITIRADREEKVDFSLPYMESGVVMVVKAEPDRLKNMWIFLKPLSWDLWLMIVL 232
            +DA+VGDITI ADR   VDF++PY ESGV MVV  +  R KN W FLKPL+WDLW+    
Sbjct: 629  FDAVVGDITITADRSNCVDFTMPYTESGVTMVVSMKDSRKKNAWAFLKPLTWDLWVTSAC 688

Query: 231  ASIFIGLVLRMLERRVNP------QRQLGMXXXXXXXXXXXPEKNMVRNKWARFVLVVWL 70
            + +FIG V+ +LE R+N         Q+G              +  V +  ARFV+VVW+
Sbjct: 689  SFVFIGFVVWVLEHRINNDFRGPLSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVVWV 748

Query: 69   FMAYILMQSYTANLSSILTVGQL 1
            F+  IL+QSYTA+L+S+LTV QL
Sbjct: 749  FVVLILVQSYTASLTSLLTVEQL 771


>ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]
           gi|355492304|gb|AES73507.1| Glutamate receptor 2.8
           [Medicago truncatula]
          Length = 990

 Score =  132 bits (332), Expect = 3e-29
 Identities = 67/143 (46%), Positives = 94/143 (65%), Gaps = 6/143 (4%)
 Frame = -3

Query: 411 YDALVGDITIRADREEKVDFSLPYMESGVVMVVKAEPDRLKNMWIFLKPLSWDLWLMIVL 232
           +DA+VGD+TI A+R + VDF++PY ESGV MVV  + +R KN W FLKPL+WDLW+    
Sbjct: 556 FDAVVGDVTIIANRSDYVDFTMPYTESGVTMVVLMKDNRKKNAWAFLKPLTWDLWVTTAC 615

Query: 231 ASIFIGLVLRMLERRVN------PQRQLGMXXXXXXXXXXXPEKNMVRNKWARFVLVVWL 70
           + +FIG V+ +LE R+N         Q+G             ++  V +  ARFV+VVW+
Sbjct: 616 SFVFIGFVVWVLEHRINKDFRGPTSHQIGTSLWFSFSTMVFAQRERVVSNLARFVVVVWV 675

Query: 69  FMAYILMQSYTANLSSILTVGQL 1
           F+  IL+QSYTA+L+S+LTV QL
Sbjct: 676 FVVLILVQSYTASLTSLLTVEQL 698


>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score =  132 bits (331), Expect = 4e-29
 Identities = 70/143 (48%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
 Frame = -3

Query: 411 YDALVGDITIRADREEKVDFSLPYMESGVVMVVKAEPDRLKNMWIFLKPLSWDLWLMIVL 232
           +DA VGDITI A+R   VDF+LP+ ESG+ MVV  + D  +NMWIFLKPLS +LWL   +
Sbjct: 434 FDAAVGDITIIANRSTYVDFTLPFSESGITMVVLTKRDERENMWIFLKPLSLELWLTTGI 493

Query: 231 ASIFIGLVLRMLERRVN------PQRQLGMXXXXXXXXXXXPEKNMVRNKWARFVLVVWL 70
           A I  GLV+ +LE R N      P +QLG              +  V N W RFVL++W+
Sbjct: 494 AFILTGLVVWVLEHRENKVFRGKPAQQLGTTLWFSFSTLFFAHREKVVNNWTRFVLIIWI 553

Query: 69  FMAYILMQSYTANLSSILTVGQL 1
           F+  I+ QSYTA+L+SILTV +L
Sbjct: 554 FVVLIISQSYTASLASILTVKRL 576


>ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
          Length = 482

 Score =  131 bits (329), Expect = 6e-29
 Identities = 71/148 (47%), Positives = 94/148 (63%), Gaps = 11/148 (7%)
 Frame = -3

Query: 411 YDALVGDITIRADREEKVDFSLPYMESGVVMVVKAEPDRLKNMWIFLKPLSWDLWLMIVL 232
           YD +VGDITI A+R   VDF+LPY  SG  M+V  +  R + MWIF+KP SWDLWL IV+
Sbjct: 117 YDVVVGDITILANRSNMVDFTLPYTGSGFKMLVTVQHGRQQTMWIFVKPFSWDLWLSIVI 176

Query: 231 ASIFIGLVLRMLERRVN-PQRQLGM----------XXXXXXXXXXXPEKNMVRNKWARFV 85
            S FIG+ + ++ER VN P  Q G+                     PE+ +V    +RFV
Sbjct: 177 ISTFIGVSILVMERNVNAPTDQEGLPNRKKLSPATILWFPISQAILPERQVVAKNCSRFV 236

Query: 84  LVVWLFMAYILMQSYTANLSSILTVGQL 1
           L++WL +A++LMQSYTANL+SILT+ QL
Sbjct: 237 LMIWLLLAFVLMQSYTANLTSILTLDQL 264


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