BLASTX nr result

ID: Cnidium21_contig00047746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047746
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273873.2| PREDICTED: uncharacterized protein LOC100255...    54   1e-09
emb|CBI21838.3| unnamed protein product [Vitis vinifera]               54   1e-09
emb|CAN73945.1| hypothetical protein VITISV_032245 [Vitis vinifera]    53   2e-09
ref|NP_194555.1| uncharacterized protein [Arabidopsis thaliana] ...    44   9e-09
ref|XP_002869513.1| hypothetical protein ARALYDRAFT_491947 [Arab...    44   4e-08

>ref|XP_002273873.2| PREDICTED: uncharacterized protein LOC100255678 [Vitis vinifera]
          Length = 520

 Score = 53.9 bits (128), Expect(3) = 1e-09
 Identities = 22/33 (66%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   VCQHKVLPGKDVATLLNVKTSRQMCSSRDLNGA 100
           +CQHK+LPGKDVATL+N+KT + +CSSR++ GA
Sbjct: 346 ICQHKMLPGKDVATLMNMKTGKLVCSSRNVYGA 378



 Score = 32.0 bits (71), Expect(3) = 1e-09
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 111 YVFHISC--HRILLCQLEICNNQIPGSEVTQRCRR 209
           +VFH SC  H ILLC+ EI  NQ+   ++ +  RR
Sbjct: 380 HVFHTSCLIHWILLCEFEIFTNQLVCPKLRRSSRR 414



 Score = 20.8 bits (42), Expect(3) = 1e-09
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 262 VFCAECLWTGMNI 300
           VFC EC  TG+ I
Sbjct: 439 VFCPECQGTGIMI 451


>emb|CBI21838.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 53.9 bits (128), Expect(3) = 1e-09
 Identities = 22/33 (66%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   VCQHKVLPGKDVATLLNVKTSRQMCSSRDLNGA 100
           +CQHK+LPGKDVATL+N+KT + +CSSR++ GA
Sbjct: 175 ICQHKMLPGKDVATLMNMKTGKLVCSSRNVYGA 207



 Score = 32.0 bits (71), Expect(3) = 1e-09
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 111 YVFHISC--HRILLCQLEICNNQIPGSEVTQRCRR 209
           +VFH SC  H ILLC+ EI  NQ+   ++ +  RR
Sbjct: 209 HVFHTSCLIHWILLCEFEIFTNQLVCPKLRRSSRR 243



 Score = 20.8 bits (42), Expect(3) = 1e-09
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 262 VFCAECLWTGMNI 300
           VFC EC  TG+ I
Sbjct: 268 VFCPECQGTGIMI 280


>emb|CAN73945.1| hypothetical protein VITISV_032245 [Vitis vinifera]
          Length = 896

 Score = 52.8 bits (125), Expect(3) = 2e-09
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +2

Query: 2   VCQHKVLPGKDVATLLNVKTSRQMCSSRDLNGA 100
           +CQHK+LPGKDVATL N+KT + +CSSR++ GA
Sbjct: 682 ICQHKMLPGKDVATLXNMKTGKLVCSSRNVYGA 714



 Score = 32.0 bits (71), Expect(3) = 2e-09
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = +3

Query: 111 YVFHISC--HRILLCQLEICNNQIPGSEVTQRCRR 209
           +VFH SC  H ILLC+ EI  NQ+   ++ +  RR
Sbjct: 716 HVFHTSCLIHWILLCEFEIFTNQLVCPKLRRSSRR 750



 Score = 20.8 bits (42), Expect(3) = 2e-09
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 262 VFCAECLWTGMNI 300
           VFC EC  TG+ I
Sbjct: 775 VFCPECQGTGIMI 787


>ref|NP_194555.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145334149|ref|NP_001078455.1| uncharacterized protein
           [Arabidopsis thaliana] gi|7269680|emb|CAB79628.1|
           putative protein [Arabidopsis thaliana]
           gi|110742700|dbj|BAE99261.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660060|gb|AEE85460.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332660061|gb|AEE85461.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 516

 Score = 43.9 bits (102), Expect(3) = 9e-09
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   VCQHKVLPGKDVATLLNVKTSRQMCSSRDLNGA 100
           VC+ K+LPGKD A +LN+KT    C SR+L GA
Sbjct: 338 VCKQKMLPGKDAAAILNMKTGNLACGSRNLLGA 370



 Score = 34.7 bits (78), Expect(3) = 9e-09
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = +3

Query: 111 YVFHISC--HRILLCQLEICNNQIPGSEVTQRCRR*VEVT----KELLKDGEGKIYSILC 272
           ++FH+SC  H  L C+ EI  N++   +  +RC +    T     EL  D   +I+S+ C
Sbjct: 372 HLFHVSCVVHWFLFCESEILGNKMVSGKGKKRCTKHSGQTGVKWNELANDVSWQIFSVFC 431



 Score = 25.0 bits (53), Expect(3) = 9e-09
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 256 YIVFCAECLWTGMNICG 306
           + VFC EC  TG+NI G
Sbjct: 427 FSVFCPECQGTGINIEG 443


>ref|XP_002869513.1| hypothetical protein ARALYDRAFT_491947 [Arabidopsis lyrata subsp.
           lyrata] gi|297315349|gb|EFH45772.1| hypothetical protein
           ARALYDRAFT_491947 [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score = 43.9 bits (102), Expect(3) = 4e-08
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   VCQHKVLPGKDVATLLNVKTSRQMCSSRDLNGA 100
           VC+ K+LPGKD A +LN+KT    C SR+L GA
Sbjct: 338 VCKQKMLPGKDAAAILNMKTGNLACGSRNLLGA 370



 Score = 32.3 bits (72), Expect(3) = 4e-08
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +3

Query: 111 YVFHISC--HRILLCQLEICNNQIPGSEVTQRCRR*VE-----VTKELLKDGEGKIYSIL 269
           ++FH+SC  H  L C+ EI  N++   +  +RC +           EL  D   +I+S+ 
Sbjct: 372 HLFHVSCVVHWFLFCESEILGNKMVSGKGKKRCTKHSSGQTGVKWNELANDVSWQIFSVF 431

Query: 270 C 272
           C
Sbjct: 432 C 432



 Score = 25.0 bits (53), Expect(3) = 4e-08
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 256 YIVFCAECLWTGMNICG 306
           + VFC EC  TG+NI G
Sbjct: 428 FSVFCPECQGTGINIEG 444


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