BLASTX nr result

ID: Cnidium21_contig00047716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047716
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   239   2e-61
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   238   3e-61
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   227   9e-58
gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japo...   218   4e-55
gb|EAZ04883.1| hypothetical protein OsI_27065 [Oryza sativa Indi...   218   4e-55

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  239 bits (610), Expect = 2e-61
 Identities = 118/157 (75%), Positives = 141/157 (89%)
 Frame = -2

Query: 473  SASRDQDPAIKSVVFSQFRKMLILLEEPLKKAGFKILRLDGSMNAKKRAQVIKDFDVPAP 294
            SASRDQ+P+ KSVVFSQFRKML+LLE+PLK AGFK LRLDGSMNAK+RAQVI++F  P P
Sbjct: 710  SASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGP 769

Query: 293  DGPTVLLASLKASGTGVNLTVASRVYLLEPWWNPAVEKQAMDRVHRIGQTKEVRIVRIIA 114
            +GPTVLLASLKASG G+NLT ASRVYLLEPWWNPAVE+QAMDRVHRIGQ ++V+IVR+IA
Sbjct: 770  NGPTVLLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIA 829

Query: 113  RNSIEERILELQDKKKRMASDAFDRKGGPTETREINI 3
            RNSIEERILELQ++KK++A +AF R+ G  + RE+ +
Sbjct: 830  RNSIEERILELQERKKKLAKEAFGRR-GLKDRREVGV 865


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  238 bits (608), Expect = 3e-61
 Identities = 119/156 (76%), Positives = 141/156 (90%)
 Frame = -2

Query: 470  ASRDQDPAIKSVVFSQFRKMLILLEEPLKKAGFKILRLDGSMNAKKRAQVIKDFDVPAPD 291
            ASR ++PA KSVVFSQF+KML+LLEEPLK+AGFKILRLDGSMNAKKRAQVIK F VP PD
Sbjct: 636  ASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPD 695

Query: 290  GPTVLLASLKASGTGVNLTVASRVYLLEPWWNPAVEKQAMDRVHRIGQTKEVRIVRIIAR 111
            GPTVLLASLKASG G+NL VASRVYLLEPWWNPAVE+QAMDRVHRIGQ ++V +VR+IA+
Sbjct: 696  GPTVLLASLKASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQ 755

Query: 110  NSIEERILELQDKKKRMASDAFDRKGGPTETREINI 3
            +SIEERILE+Q++KK++A +AF R+G  T+ RE+ I
Sbjct: 756  SSIEERILEMQERKKKLAKEAFGRRGTKTQ-REVGI 790


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/146 (73%), Positives = 132/146 (90%)
 Frame = -2

Query: 470 ASRDQDPAIKSVVFSQFRKMLILLEEPLKKAGFKILRLDGSMNAKKRAQVIKDFDVPAPD 291
           A+RD++P  KSV+FSQF+KML+LLEEPLK AGFKILRLDG+MNAKK+AQVIK+F +P P+
Sbjct: 201 AARDKNPTAKSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMNAKKKAQVIKEFGIPGPN 260

Query: 290 GPTVLLASLKASGTGVNLTVASRVYLLEPWWNPAVEKQAMDRVHRIGQTKEVRIVRIIAR 111
           GPTVLLASLKAS  G+NL  AS+VYLLEPWWNPAVE+QAMDRVHRIGQ ++V +VR+I R
Sbjct: 261 GPTVLLASLKASCAGINLAAASKVYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLITR 320

Query: 110 NSIEERILELQDKKKRMASDAFDRKG 33
           NSIEERILE+Q++KK++A +AF R+G
Sbjct: 321 NSIEERILEMQERKKKLAKEAFGRRG 346


>gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group]
          Length = 641

 Score =  218 bits (555), Expect = 4e-55
 Identities = 107/155 (69%), Positives = 128/155 (82%)
 Frame = -2

Query: 467 SRDQDPAIKSVVFSQFRKMLILLEEPLKKAGFKILRLDGSMNAKKRAQVIKDFDVPAPDG 288
           S+ +DP  KSV+FSQFRKMLILLE PLK AGF ILRLDGSM AKKR++VI+ F    PD 
Sbjct: 477 SQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDS 536

Query: 287 PTVLLASLKASGTGVNLTVASRVYLLEPWWNPAVEKQAMDRVHRIGQTKEVRIVRIIARN 108
           PTVLLASLKA+G GVNLT AS VYL +PWWNP VE+QAMDRVHRIGQTKEV++VR+I ++
Sbjct: 537 PTVLLASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKD 596

Query: 107 SIEERILELQDKKKRMASDAFDRKGGPTETREINI 3
           SIEER+LELQ++KK++ S AF RK G  E +EI +
Sbjct: 597 SIEERMLELQERKKKLISGAFGRKKGGKEHKEIRV 631


>gb|EAZ04883.1| hypothetical protein OsI_27065 [Oryza sativa Indica Group]
          Length = 821

 Score =  218 bits (555), Expect = 4e-55
 Identities = 107/155 (69%), Positives = 128/155 (82%)
 Frame = -2

Query: 467  SRDQDPAIKSVVFSQFRKMLILLEEPLKKAGFKILRLDGSMNAKKRAQVIKDFDVPAPDG 288
            S+ +DP  KSV+FSQFRKMLILLE PLK AGF ILRLDGSM AKKR++VI+ F    PD 
Sbjct: 657  SQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDS 716

Query: 287  PTVLLASLKASGTGVNLTVASRVYLLEPWWNPAVEKQAMDRVHRIGQTKEVRIVRIIARN 108
            PTVLLASLKA+G GVNLT AS VYL +PWWNP VE+QAMDRVHRIGQTKEV++VR+I ++
Sbjct: 717  PTVLLASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKD 776

Query: 107  SIEERILELQDKKKRMASDAFDRKGGPTETREINI 3
            SIEER+LELQ++KK++ S AF RK G  E +EI +
Sbjct: 777  SIEERMLELQERKKKLISGAFGRKKGGKEHKEIRV 811


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