BLASTX nr result
ID: Cnidium21_contig00047699
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047699 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 135 5e-30 emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] 127 1e-27 gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 122 2e-26 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 122 2e-26 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 122 2e-26 >emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] Length = 1300 Score = 135 bits (339), Expect = 5e-30 Identities = 62/109 (56%), Positives = 79/109 (72%) Frame = +3 Query: 3 KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182 K++P WAE M+ A VINRLP + +N +P+E ++ KP VSYFR+FG VCYV VP+ Sbjct: 597 KNVPGXFWAEXMKTAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNH 656 Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDEISSYY 329 LR+KMD KA +CV VGYD RK WRC +P T K TSR+VVFDE SS++ Sbjct: 657 LRSKMDKKAVRCVLVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWW 705 >emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] Length = 1194 Score = 127 bits (319), Expect = 1e-27 Identities = 58/109 (53%), Positives = 74/109 (67%) Frame = +3 Query: 3 KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182 K++P W EAM+ A VINRLP + +N +P+E ++ KP VSYFR+FG VCY VP+ Sbjct: 594 KNVPGRFWVEAMKTAAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFRVFGCVCYAFVPNH 653 Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDEISSYY 329 R+KMD K +CV VGYD K WRC P T K TSR+VVFDE SS++ Sbjct: 654 XRSKMDKKXVRCVLVGYDSQXKRWRCCNPTTGKYYTSRNVVFDESSSWW 702 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 122 bits (307), Expect = 2e-26 Identities = 53/104 (50%), Positives = 78/104 (75%) Frame = +3 Query: 3 KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182 K LPKELWAEA+ CA +++NR P++S++ KTP E KP VS+ R+FGS+ + HVPD+ Sbjct: 588 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 647 Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314 R+K+D K++K +F+GYD N KG++ P+T K + SR++VFDE Sbjct: 648 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 691 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 122 bits (307), Expect = 2e-26 Identities = 53/104 (50%), Positives = 78/104 (75%) Frame = +3 Query: 3 KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182 K LPKELWAEA+ CA +++NR P++S++ KTP E KP VS+ R+FGS+ + HVPD+ Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708 Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314 R+K+D K++K +F+GYD N KG++ P+T K + SR++VFDE Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 122 bits (307), Expect = 2e-26 Identities = 53/104 (50%), Positives = 78/104 (75%) Frame = +3 Query: 3 KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182 K LPKELWAEA+ CA +++NR P++S++ KTP E KP VS+ R+FGS+ + HVPD+ Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708 Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314 R+K+D K++K +F+GYD N KG++ P+T K + SR++VFDE Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752