BLASTX nr result

ID: Cnidium21_contig00047699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047699
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   135   5e-30
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]   127   1e-27
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             122   2e-26
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   122   2e-26
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         122   2e-26

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/109 (56%), Positives = 79/109 (72%)
 Frame = +3

Query: 3   KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182
           K++P   WAE M+ A  VINRLP + +N  +P+E ++  KP VSYFR+FG VCYV VP+ 
Sbjct: 597 KNVPGXFWAEXMKTAAFVINRLPQQRLNFSSPFEKLWNIKPTVSYFRVFGCVCYVFVPNH 656

Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDEISSYY 329
           LR+KMD KA +CV VGYD  RK WRC +P T K  TSR+VVFDE SS++
Sbjct: 657 LRSKMDKKAVRCVLVGYDSQRKXWRCCDPTTGKCYTSRNVVFDESSSWW 705


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score =  127 bits (319), Expect = 1e-27
 Identities = 58/109 (53%), Positives = 74/109 (67%)
 Frame = +3

Query: 3   KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182
           K++P   W EAM+ A  VINRLP + +N  +P+E ++  KP VSYFR+FG VCY  VP+ 
Sbjct: 594 KNVPGRFWVEAMKTAAFVINRLPQQRLNFSSPFEKLWNIKPIVSYFRVFGCVCYAFVPNH 653

Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDEISSYY 329
            R+KMD K  +CV VGYD   K WRC  P T K  TSR+VVFDE SS++
Sbjct: 654 XRSKMDKKXVRCVLVGYDSQXKRWRCCNPTTGKYYTSRNVVFDESSSWW 702


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/104 (50%), Positives = 78/104 (75%)
 Frame = +3

Query: 3   KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182
           K LPKELWAEA+ CA +++NR P++S++ KTP E     KP VS+ R+FGS+ + HVPD+
Sbjct: 588 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 647

Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314
            R+K+D K++K +F+GYD N KG++   P+T K + SR++VFDE
Sbjct: 648 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 691


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/104 (50%), Positives = 78/104 (75%)
 Frame = +3

Query: 3   KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182
           K LPKELWAEA+ CA +++NR P++S++ KTP E     KP VS+ R+FGS+ + HVPD+
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708

Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314
            R+K+D K++K +F+GYD N KG++   P+T K + SR++VFDE
Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/104 (50%), Positives = 78/104 (75%)
 Frame = +3

Query: 3   KSLPKELWAEAMQCACHVINRLPSRSINMKTPYELVYKEKPYVSYFRIFGSVCYVHVPDQ 182
           K LPKELWAEA+ CA +++NR P++S++ KTP E     KP VS+ R+FGS+ + HVPD+
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708

Query: 183 LRAKMDAKAKKCVFVGYDPNRKGWRCMEPETLKVVTSRDVVFDE 314
            R+K+D K++K +F+GYD N KG++   P+T K + SR++VFDE
Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE 752


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