BLASTX nr result

ID: Cnidium21_contig00047689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047689
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX85638.1| putative transposase [Cucumis melo]                     79   8e-16
ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-13
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    79   5e-13
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    66   1e-11
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                60   2e-10

>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score = 78.6 bits (192), Expect(2) = 8e-16
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = -1

Query: 320 NLLALTFNKVRCRSALAKFVVKDEQAFNVVEGAGFKELVQELQPQFVVPGRMTITRGVYQ 141
           NL+  +F +  CR  LA+ V+ DE  F  VE  GF +  + L P+FV+P R+T+ +  +Q
Sbjct: 96  NLMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCRALNPKFVIPSRVTVAKDCFQ 155

Query: 140 IFCNEGVKLMKDLTKAGQRISLTTD 66
           ++  E  KL   LT++GQR+ LTTD
Sbjct: 156 MYMKEKKKLKNALTRSGQRVCLTTD 180



 Score = 29.6 bits (65), Expect(2) = 8e-16
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 63  TSCTQMSYMCLIAHYIDSEWN 1
           TS   ++YM + AH+ID +WN
Sbjct: 183 TSVQNINYMVITAHFIDDDWN 203


>ref|XP_002319289.1| predicted protein [Populus trichocarpa] gi|222857665|gb|EEE95212.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 75.1 bits (183), Expect(2) = 2e-13
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
 Frame = -1

Query: 368 KKQKVLSFQ-------VGNKAGGNLLALTFNKVRCRSALAKFVVKDEQAFNVVEGAGFKE 210
           KKQK+L  +       +G+++ G L A+ +    CR AL K V+ DE  FN +EG GF+ 
Sbjct: 115 KKQKILVLEPNKVGGELGDRSVGTLKAIGYEYDECRKALVKMVIIDELPFNFMEGKGFRL 174

Query: 209 LVQELQPQFVVPGRMTITRGVYQIFCNEGVKLMKDLTKAGQRISLTTD 66
             + LQP+F +P R T+ R   ++   E  +L +DL   GQR+ LTTD
Sbjct: 175 FSRTLQPRFDIPSRFTVMRDCLKLHVEEKERLKRDL--KGQRLCLTTD 220



 Score = 25.0 bits (53), Expect(2) = 2e-13
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 63  TSCTQMSYMCLIAHYIDSE 7
           TS   ++YM L AH+ID+E
Sbjct: 223 TSIQNINYMSLTAHWIDNE 241


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
 Frame = -1

Query: 365 KQKVLSFQVGNK-------AGGNLLALTFNKVRCRSALAKFVVKDEQAFNVVEGAGFKEL 207
           KQK LSFQ  NK       +G  LLA +FN   CR  LA+ ++ DE AF  V+G GF+  
Sbjct: 95  KQKTLSFQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQGEGFRAF 154

Query: 206 VQELQPQFVVPGRMTITRGVYQIFCNEGVKLMKDLTKAGQRI 81
              LQP+F +P R T+ +   Q++ +E  KL   LT+  Q++
Sbjct: 155 CSPLQPKFFIPSRATVAKDCSQLYSSEKKKLKSVLTRLSQKV 196


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 65.9 bits (159), Expect(2) = 1e-11
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -1

Query: 362  QKVLSFQ--VGNKAGGNLLALTFNKVRCRSALAKFVVKDEQAFNVVEGAGFKELVQELQP 189
            Q +LS Q   G  +   ++A+ F+    R ALA+ ++ DE  F+ VE  GF+  +   QP
Sbjct: 1016 QTILSLQDSKGTSSNSTIVAVHFDVDVSRQALARMIIVDELPFSFVENEGFRYFMSVTQP 1075

Query: 188  QFVVPGRMTITRGVYQIFCNEGVKLMKDLTKAGQRISLTTD 66
            +  +PGR+ I R    ++ +E  KL    TKA Q + LTTD
Sbjct: 1076 RLPLPGRLAIARDCLNLYTSEKHKLRNMFTKANQSVCLTTD 1116



 Score = 28.1 bits (61), Expect(2) = 1e-11
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 63   TSCTQMSYMCLIAHYIDSEW 4
            TS   ++YM L AH+ID +W
Sbjct: 1119 TSVQNINYMVLTAHFIDQDW 1138


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 59.7 bits (143), Expect(2) = 2e-10
 Identities = 35/97 (36%), Positives = 51/97 (52%)
 Frame = -1

Query: 356 VLSFQVGNKAGGNLLALTFNKVRCRSALAKFVVKDEQAFNVVEGAGFKELVQELQPQFVV 177
           ++S   GN AG   +   F++  CR A  K ++ DE +F+ VE  GFK   +   P F +
Sbjct: 90  IVSSGGGNGAG---MIKPFDQNVCRQATVKMIIMDELSFSFVENDGFKHFCEMAVPWFTI 146

Query: 176 PGRMTITRGVYQIFCNEGVKLMKDLTKAGQRISLTTD 66
           P R TITR V  ++  E   L   L++  Q +S TTD
Sbjct: 147 PSRRTITRDVVGLYRAEKTALKTILSRNRQAMSFTTD 183



 Score = 30.0 bits (66), Expect(2) = 2e-10
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 63  TSCTQMSYMCLIAHYIDSEW 4
           TS T +SYM + AH+ID +W
Sbjct: 186 TSITTLSYMVVTAHFIDMDW 205


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