BLASTX nr result

ID: Cnidium21_contig00047674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047674
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indi...   112   4e-23
gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japoni...   104   8e-21
gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]        104   8e-21
ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   103   2e-20
gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japoni...   102   3e-20

>gb|EEC82986.1| hypothetical protein OsI_28021 [Oryza sativa Indica Group]
          Length = 937

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/120 (43%), Positives = 70/120 (58%)
 Frame = +2

Query: 2   MWRFEQTKKQKRTNSNKFSLCCDNGKVXXXXXXXXXXXXKSLLDGTNNKSTTFRKSLRLY 181
           +W  E+    K T +  F +CC  GK+            K LL G    ST FR+++R Y
Sbjct: 107 LWYEERLNSNKSTTNPSFGMCCKQGKIKLPPLKEPPQYLKRLLTGEGKDSTNFRENIRSY 166

Query: 182 NNAFAFTSVGANVDKEINNGGGPYVYRISGEVYHQIGSLTPNGSEKAIFAQIYMYDNQQQ 361
           N+ FAFTS+G  VDKEIN G GPYV+R+ G+ YH IG+L P    K  FAQ+Y+YD + +
Sbjct: 167 NSMFAFTSMGGIVDKEINMGKGPYVFRLHGQNYHHIGTLLPEEGNKPRFAQLYIYDTENE 226


>gb|AAK54292.1|AC034258_10 putative helicase [Oryza sativa Japonica Group]
          Length = 1501

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/120 (40%), Positives = 71/120 (59%)
 Frame = +2

Query: 2   MWRFEQTKKQKRTNSNKFSLCCDNGKVXXXXXXXXXXXXKSLLDGTNNKSTTFRKSLRLY 181
           MW  E++          F LCC  GKV             SLL     +ST +++++R Y
Sbjct: 170 MWHAERSL-HSTVKQPSFGLCCKQGKVALPPLKEQPPYLTSLLTRDGGRSTNYQQNIRSY 228

Query: 182 NNAFAFTSVGANVDKEINNGGGPYVYRISGEVYHQIGSLTPNGSEKAIFAQIYMYDNQQQ 361
           N+ FAFTS+G  VD++INNG GPY++R++G+ +H IG+L P GS K  F Q+Y+YD + +
Sbjct: 229 NSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTLLPEGSNKPRFQQLYVYDTENE 288


>gb|ABB47755.2| expressed protein [Oryza sativa Japonica Group]
          Length = 1517

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/120 (40%), Positives = 71/120 (59%)
 Frame = +2

Query: 2   MWRFEQTKKQKRTNSNKFSLCCDNGKVXXXXXXXXXXXXKSLLDGTNNKSTTFRKSLRLY 181
           MW  E++          F LCC  GKV             SLL     +ST +++++R Y
Sbjct: 170 MWHAERSL-HSTVKQPSFGLCCKQGKVALPPLKEQPPYLTSLLTRDGGRSTNYQQNIRSY 228

Query: 182 NNAFAFTSVGANVDKEINNGGGPYVYRISGEVYHQIGSLTPNGSEKAIFAQIYMYDNQQQ 361
           N+ FAFTS+G  VD++INNG GPY++R++G+ +H IG+L P GS K  F Q+Y+YD + +
Sbjct: 229 NSMFAFTSMGGTVDRKINNGHGPYIFRLNGQNHHHIGTLLPEGSNKPRFQQLYVYDTENE 288


>ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355506731|gb|AES87873.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1561

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/120 (40%), Positives = 71/120 (59%)
 Frame = +2

Query: 2   MWRFEQTKKQKRTNSNKFSLCCDNGKVXXXXXXXXXXXXKSLLDGTNNKSTTFRKSLRLY 181
           +W  E+++K +R +   FS+CC  GKV             SL++G + +S  F+ + R Y
Sbjct: 211 LWYEERSEKSRRGSDIDFSICCQKGKVELPLITRPPRLLLSLINGYDRRSKHFKDNYRAY 270

Query: 182 NNAFAFTSVGANVDKEINNGGGPYVYRISGEVYHQIGSLTPNGSEKAIFAQIYMYDNQQQ 361
           N+ FAFTS+G N+   INNGGGP  + + G+ YH+IGSL P       FAQ+Y+YD Q +
Sbjct: 271 NSMFAFTSMGGNIQTTINNGGGPPQFILGGQNYHRIGSLLPEPGTTPKFAQLYIYDTQNE 330


>gb|AAK54302.1|AC034258_20 putative helicase [Oryza sativa Japonica Group]
           gi|31432486|gb|AAP54108.1| AT hook motif-containing
           protein, putative [Oryza sativa Japonica Group]
          Length = 1573

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/111 (42%), Positives = 67/111 (60%)
 Frame = +2

Query: 29  QKRTNSNKFSLCCDNGKVXXXXXXXXXXXXKSLLDGTNNKSTTFRKSLRLYNNAFAFTSV 208
           ++R N   F LCC  GKV             SLL      S  +++++R YN+ FAFTS+
Sbjct: 193 RQRKNQPSFGLCCKQGKVALPPLKEPPHFLSSLLARDGGTSENYQQNIRSYNSMFAFTSM 252

Query: 209 GANVDKEINNGGGPYVYRISGEVYHQIGSLTPNGSEKAIFAQIYMYDNQQQ 361
           G  VD++IN G GPYV+R++G+ YH IG+L P GS K  F Q+Y+YD + +
Sbjct: 253 GGAVDRKINKGRGPYVFRLNGQNYHHIGTLLPKGSNKPRFQQLYIYDTENE 303


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