BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047668
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   150   1e-34
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-32
ref|XP_003637737.1| Pentatricopeptide repeat-containing protein ...   143   2e-32
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31

>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/107 (66%), Positives = 86/107 (80%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           GL PNVVSWTALISGC QN  YK +LEFFI MQ+EGIKPNSTTV  LL+ C GLSLL KG
Sbjct: 533 GLTPNVVSWTALISGCSQNGNYKESLEFFIQMQQEGIKPNSTTVSSLLKTCGGLSLLKKG 592

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           KEIH +++++GF  D++  T LVDMYSK G+LK+A  +F+R +NKTL
Sbjct: 593 KEIHCLSVKSGFTGDIYIATALVDMYSKSGNLKSAREVFKRTKNKTL 639



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/106 (34%), Positives = 59/106 (55%)
 Frame = -3

Query: 319 LKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGK 140
           +KP++++W  L+SG   +  YK  L     MQ  G +PNS+++  +LQ    L LL  GK
Sbjct: 363 VKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSITSVLQTVTELRLLKIGK 422

Query: 139 EIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
            IH   IRN    D++   +L+DMY K   L T+  +F  ++N+ +
Sbjct: 423 GIHGYVIRNRLNPDLYVEASLLDMYVKNNCLATSQAVFDNMKNRNI 468



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/99 (31%), Positives = 56/99 (56%)
 Frame = -3

Query: 298 WTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGKEIHSMAI 119
           W   I   L+NE++  A+E F  MQ    K +++TVL +LQAC     L++GK+IH   I
Sbjct: 234 WNEAIMINLKNERFGNAIELFRGMQFSFAKADASTVLKMLQACGKEEALNEGKQIHGYVI 293

Query: 118 RNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           ++    +++   +L+ MYS+ G +  +  +F  +++  L
Sbjct: 294 KHALESNLWISNSLISMYSRNGKIILSRRVFDSMKDHNL 332


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/107 (64%), Positives = 84/107 (78%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           GL PNVVSWTALISG  Q    + +L+FF  MQ+EG+ PNS ++ CLL+ACA LSLL KG
Sbjct: 501 GLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKG 560

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           KEIH ++IRNGFI+DVF  T L+DMYSK  SLK A+ +F+RIQNKTL
Sbjct: 561 KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 607



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/106 (39%), Positives = 65/106 (61%)
 Frame = -3

Query: 319 LKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGK 140
           +KP++V+W  L+SG   +   +  L     MQ EG KPNS+++  +LQA + L  L+ GK
Sbjct: 331 MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK 390

Query: 139 EIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           E H   +RNGF  DV+  T+L+DMY K  SL +A  +F  ++N+ +
Sbjct: 391 ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNI 436



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/102 (34%), Positives = 53/102 (51%)
 Frame = -3

Query: 313 PNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGKEI 134
           P  + W   I   LQ+EK +  +E F  MQ   +K  + T++ +LQAC  +  L+  K+I
Sbjct: 197 PEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQI 256

Query: 133 HSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNK 8
           H    R G   DV     L+ MYSK G L+ A  +F  ++N+
Sbjct: 257 HGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENR 298


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/107 (60%), Positives = 84/107 (78%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           GL PNVVSWTA+ISGC QNE Y  AL+FF  MQ+E +KPNSTT+  LL+ACAG SLL KG
Sbjct: 499 GLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKG 558

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           +EIH  ++++GF+DD++  T L+DMYSK G LK A+ +F+ I+ KTL
Sbjct: 559 EEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTL 605



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/106 (35%), Positives = 59/106 (55%)
 Frame = -3

Query: 319 LKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGK 140
           +KP++++W +L+SG L    Y+  L     +Q  G KP+S ++   LQA   L   + GK
Sbjct: 329 IKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGK 388

Query: 139 EIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           EIH   +R+    DV+  T+LVDMY K   L+ A  +F   +NK +
Sbjct: 389 EIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNI 434



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/99 (32%), Positives = 53/99 (53%)
 Frame = -3

Query: 298 WTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGKEIHSMAI 119
           W  ++   L++E+++ ALE    MQ    K    T++ LLQAC  L  L++GK+IH   I
Sbjct: 200 WNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVI 259

Query: 118 RNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           R G + +     ++V MYS+   L+ A  +F   ++  L
Sbjct: 260 RFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNL 298


>ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503672|gb|AES84875.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/107 (61%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           G+ PNVVSWTALISGC QNEKY  AL+ F  MQ E +KPNSTT+  LL ACAG SLL KG
Sbjct: 149 GITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKG 208

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           +E+H  +++ GF+DD++  T L+DMYS+ G LK AYN+F +IQ KTL
Sbjct: 209 EELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTL 255


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/107 (59%), Positives = 82/107 (76%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           GL PNVVSWTA+ISGC QNE Y  AL+FF  MQ+E +KPNSTT+  LL+ACAG SLL  G
Sbjct: 499 GLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIG 558

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           +EIH  ++R+GF+DD++  T L+DMY K G LK A+ +F+ I+ KTL
Sbjct: 559 EEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTL 605



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/107 (37%), Positives = 60/107 (56%)
 Frame = -3

Query: 322 GLKPNVVSWTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKG 143
           G+KP++++W +L+SG L    Y+  L  F  +Q  G KP+S ++   LQA  GL   + G
Sbjct: 328 GVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLG 387

Query: 142 KEIHSMAIRNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQNKTL 2
           KEIH   +R+    DV+  T+LVD Y K   L  A  +F   +NK +
Sbjct: 388 KEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNI 434



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = -3

Query: 298 WTALISGCLQNEKYKAALEFFIMMQKEGIKPNSTTVLCLLQACAGLSLLHKGKEIHSMAI 119
           W  ++   L++EK++ ALE F  MQ    K    T++ LLQAC  L  L++GK+IH   I
Sbjct: 200 WNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVI 259

Query: 118 RNGFIDDVFFMTTLVDMYSKCGSLKTAYNIFQRIQN 11
           R G + +     ++V MYS+   L+ A   F   ++
Sbjct: 260 RFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTED 295