BLASTX nr result
ID: Cnidium21_contig00047644
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047644 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi... 182 2e-44 ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|2... 177 6e-43 emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera] 177 8e-43 ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi... 172 2e-41 ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, put... 172 2e-41 >ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920-like [Cucumis sativus] gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920-like [Cucumis sativus] Length = 606 Score = 182 bits (462), Expect = 2e-44 Identities = 83/140 (59%), Positives = 107/140 (76%) Frame = +2 Query: 5 CSSNLLLTCIQLSWGSMDYACSIFNQIDDPGSFEFNIMIRGYVKDMNFDEALFMYHQMLD 184 CSS++L TC W SMDYACSIF Q+D+P +F+FN MIRGYV +MNF+ A+++Y+ ML Sbjct: 66 CSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQ 125 Query: 185 MDVVPDNFTYPFLLKACAQLRDVKKGVQIHGQVFKLGFEDNVFVQNSLINFYGKXXXXXX 364 +V PDNFTYP +LKACA+L +++G+QIHG VFKLG ED+V+VQNSLIN YGK Sbjct: 126 REVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEM 185 Query: 365 XXXXXXKMEQRSVASWSALI 424 +MEQ+SVASWSA+I Sbjct: 186 SCAIFRRMEQKSVASWSAII 205 >ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa] Length = 559 Score = 177 bits (450), Expect = 6e-43 Identities = 83/140 (59%), Positives = 101/140 (72%) Frame = +2 Query: 5 CSSNLLLTCIQLSWGSMDYACSIFNQIDDPGSFEFNIMIRGYVKDMNFDEALFMYHQMLD 184 C+SNL+ TC WGSMDYACSIF QID PG+FEFN MIRGYV MN + ALF+Y++ML+ Sbjct: 19 CASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLE 78 Query: 185 MDVVPDNFTYPFLLKACAQLRDVKKGVQIHGQVFKLGFEDNVFVQNSLINFYGKXXXXXX 364 V DNFTYP L KACA LR +++G+QIHG +FK G E ++FVQNSLIN YGK Sbjct: 79 RGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIEL 138 Query: 365 XXXXXXKMEQRSVASWSALI 424 M++R VASWSA+I Sbjct: 139 SCSVFEHMDRRDVASWSAII 158 >emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera] Length = 562 Score = 177 bits (449), Expect = 8e-43 Identities = 83/140 (59%), Positives = 104/140 (74%) Frame = +2 Query: 5 CSSNLLLTCIQLSWGSMDYACSIFNQIDDPGSFEFNIMIRGYVKDMNFDEALFMYHQMLD 184 C+SNL+ TC WGSMDYACSIF Q+D+PGSF+FN M+RG+VKDMN +EAL Y +M + Sbjct: 22 CASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAE 81 Query: 185 MDVVPDNFTYPFLLKACAQLRDVKKGVQIHGQVFKLGFEDNVFVQNSLINFYGKXXXXXX 364 V PDNFTYP LLKACA+L V++G+Q+H + KLG E++VFVQNSLI+ YGK Sbjct: 82 RGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGV 141 Query: 365 XXXXXXKMEQRSVASWSALI 424 +M +RSVASWSALI Sbjct: 142 CCAVFEQMNERSVASWSALI 161 >ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920 [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera] Length = 605 Score = 172 bits (437), Expect = 2e-41 Identities = 82/140 (58%), Positives = 103/140 (73%) Frame = +2 Query: 5 CSSNLLLTCIQLSWGSMDYACSIFNQIDDPGSFEFNIMIRGYVKDMNFDEALFMYHQMLD 184 C+SNL+ TC WGSMDYACSIF Q+D+ GSF+FN M+RG+VKDMN +EAL Y +M + Sbjct: 65 CASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAE 124 Query: 185 MDVVPDNFTYPFLLKACAQLRDVKKGVQIHGQVFKLGFEDNVFVQNSLINFYGKXXXXXX 364 V PDNFTYP LLKACA+L V++G+Q+H + KLG E++VFVQNSLI+ YGK Sbjct: 125 RGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGV 184 Query: 365 XXXXXXKMEQRSVASWSALI 424 +M +RSVASWSALI Sbjct: 185 CCAVFEQMNERSVASWSALI 204 >ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis] gi|223541982|gb|EEF43528.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis] Length = 1203 Score = 172 bits (437), Expect = 2e-41 Identities = 77/140 (55%), Positives = 102/140 (72%) Frame = +2 Query: 5 CSSNLLLTCIQLSWGSMDYACSIFNQIDDPGSFEFNIMIRGYVKDMNFDEALFMYHQMLD 184 C+SNL+ TC WGSMDYACSIF QID PGSFE+N MI+GYV D + AL +Y++ML+ Sbjct: 926 CASNLVATCALSHWGSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYYEMLE 985 Query: 185 MDVVPDNFTYPFLLKACAQLRDVKKGVQIHGQVFKLGFEDNVFVQNSLINFYGKXXXXXX 364 +V DNFTYP L+KACA LR + + +QIHG +FKLGFE++++VQNSLIN YGK Sbjct: 986 KEVQSDNFTYPALIKACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSLINMYGKCGKIEL 1045 Query: 365 XXXXXXKMEQRSVASWSALI 424 ++E + +ASWS++I Sbjct: 1046 SCDVFKQIEHKDIASWSSII 1065