BLASTX nr result

ID: Cnidium21_contig00047642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047642
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Ara...    96   2e-18
gb|AAF97297.1|AC010164_19 Hypothetical protein [Arabidopsis thal...    96   2e-18
gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsi...    93   2e-17
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...    92   4e-17
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...    90   2e-16

>gb|AAG52211.1|AC022288_10 hypothetical protein; 74056-75837 [Arabidopsis thaliana]
          Length = 503

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -1

Query: 336 KNPVFHGRSKHIDVRYHFIRECVERGEVILQHVSSNEQRADIMTKALIKNKFEDMRKLLG 157
           KNPVFHGRSKHI  RYHFIRECVE G++ ++HV  NEQ+ADI+TKAL + KF++MR L+G
Sbjct: 420 KNPVFHGRSKHIHRRYHFIRECVETGQIEVEHVPGNEQKADILTKALGRIKFKEMRDLVG 479

Query: 156 VKNLVEHV*N*RGE 115
           V+++V+     +GE
Sbjct: 480 VQDVVKEDFKLKGE 493


>gb|AAF97297.1|AC010164_19 Hypothetical protein [Arabidopsis thaliana]
          Length = 308

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/74 (60%), Positives = 60/74 (81%)
 Frame = -1

Query: 336 KNPVFHGRSKHIDVRYHFIRECVERGEVILQHVSSNEQRADIMTKALIKNKFEDMRKLLG 157
           KNPVFHGRSKHI  RYHFIRECVE G++ ++HV  NEQ+ADI+TKAL + KF++MR L+G
Sbjct: 225 KNPVFHGRSKHIHRRYHFIRECVETGQIEVEHVPGNEQKADILTKALGRIKFKEMRDLVG 284

Query: 156 VKNLVEHV*N*RGE 115
           V+++V+     +GE
Sbjct: 285 VQDVVKEDFKLKGE 298


>gb|AAC95173.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1200

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/64 (67%), Positives = 54/64 (84%)
 Frame = -1

Query: 336  KNPVFHGRSKHIDVRYHFIRECVERGEVILQHVSSNEQRADIMTKALIKNKFEDMRKLLG 157
            KNPVFHGRSKHI  +YHFIRECVE G+V ++HV   +QRA+I+TKAL K KF+DMR L+G
Sbjct: 1117 KNPVFHGRSKHIHRKYHFIRECVENGQVSVEHVPGVKQRANILTKALAKIKFKDMRDLIG 1176

Query: 156  VKNL 145
            V++L
Sbjct: 1177 VQDL 1180


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -1

Query: 336  KNPVFHGRSKHIDVRYHFIRECVERGEVILQHVSSNEQRADIMTKALIKNKFEDMRKLLG 157
            KNPVFHGRSKHID RYHFIRECVE G+++++ VSS EQRAD MTK L   K    R LLG
Sbjct: 1359 KNPVFHGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGLPAAKLATARHLLG 1418

Query: 156  VKNL 145
            V++L
Sbjct: 1419 VRDL 1422


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/64 (65%), Positives = 49/64 (76%)
 Frame = -1

Query: 336  KNPVFHGRSKHIDVRYHFIRECVERGEVILQHVSSNEQRADIMTKALIKNKFEDMRKLLG 157
            KNPVFHGRSKHID RYHFIRECVE G+++++ V S EQRAD MTK L   K    R LLG
Sbjct: 1359 KNPVFHGRSKHIDTRYHFIRECVESGQILIEFVRSEEQRADAMTKGLPAAKLATARHLLG 1418

Query: 156  VKNL 145
            V++L
Sbjct: 1419 VRDL 1422


Top