BLASTX nr result

ID: Cnidium21_contig00047636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047636
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              142   4e-32
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   142   4e-32
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28

>ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 317

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -3

Query: 418 DSGVWGALLAACRANLNVELGQIAADKIMELEPNNSGAYVMLSNIYAARGMWREVTGVRG 239
           D G+WGALLAAC  +LNV+LG++AA KI+ELEP NSGAYV+LSNIYAA GMW EVT VRG
Sbjct: 194 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 253

Query: 238 LMKQHGVRKQPAYSRMDVGNEVHSFVGGDISHPVI 134
           LM++ GV+KQPAYS M++ N+VH F+G D SHP I
Sbjct: 254 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEI 288


>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -3

Query: 418 DSGVWGALLAACRANLNVELGQIAADKIMELEPNNSGAYVMLSNIYAARGMWREVTGVRG 239
           D G+WGALLAAC  +LNV+LG++AA KI+ELEP NSGAYV+LSNIYAA GMW EVT VRG
Sbjct: 467 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 526

Query: 238 LMKQHGVRKQPAYSRMDVGNEVHSFVGGDISHPVI 134
           LM++ GV+KQPAYS M++ N+VH F+G D SHP I
Sbjct: 527 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEI 561


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -3

Query: 418 DSGVWGALLAACRANLNVELGQIAADKIMELEPNNSGAYVMLSNIYAARGMWREVTGVRG 239
           D G+WGALLAAC  +LNV+LG++AA KI+ELEP NSGAYV+LSNIYAA GMW EVT VRG
Sbjct: 395 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 454

Query: 238 LMKQHGVRKQPAYSRMDVGNEVHSFVGGDISHPVI 134
           LM++ GV+KQPAYS M++ N+VH F+G D SHP I
Sbjct: 455 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEI 489


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -3

Query: 418 DSGVWGALLAACRANLNVELGQIAADKIMELEPNNSGAYVMLSNIYAARGMWREVTGVRG 239
           D G+WGALLAAC  +LNV+LG++AA KI+ELEP NSGAYV+LSNIYAA GMW EVT VRG
Sbjct: 467 DCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRG 526

Query: 238 LMKQHGVRKQPAYSRMDVGNEVHSFVGGDISHPVI 134
           LM++ GV+KQPAYS M++ N+VH F+G D SHP I
Sbjct: 527 LMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEI 561


>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 579

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/95 (63%), Positives = 76/95 (80%)
 Frame = -3

Query: 418 DSGVWGALLAACRANLNVELGQIAADKIMELEPNNSGAYVMLSNIYAARGMWREVTGVRG 239
           DS +WGA+LAAC  +LNVELG++AA +I+ L+P NSGAYVMLSNIYAA G W++V  +R 
Sbjct: 450 DSSIWGAVLAACSVHLNVELGELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRV 509

Query: 238 LMKQHGVRKQPAYSRMDVGNEVHSFVGGDISHPVI 134
           LMK+ GV+KQ AYS + +GN+ H FVGGD SHP I
Sbjct: 510 LMKEQGVKKQTAYSWLQIGNKTHYFVGGDPSHPNI 544


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