BLASTX nr result

ID: Cnidium21_contig00047634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047634
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324421.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242...   145   3e-33
ref|XP_002514295.1| raspberry3, putative [Ricinus communis] gi|2...   137   9e-31
ref|XP_003529993.1| PREDICTED: uncharacterized protein LOC100818...   136   2e-30
ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777...   134   1e-29

>ref|XP_002324421.1| predicted protein [Populus trichocarpa] gi|222865855|gb|EEF02986.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/110 (62%), Positives = 88/110 (80%)
 Frame = -2

Query: 332 RNRIRKSLTNISSSIFKRELETVISACGRTRMYVDQFCHYLIKEAVTITTHGYAVVDLEI 153
           RNRIR SL N+SS  F+ EL+ VISAC RTR YVDQ C+ LI +AVTI  HGYA++DLEI
Sbjct: 83  RNRIRMSLGNLSSYTFQSELQGVISACRRTRAYVDQICNNLINQAVTIIDHGYAIIDLEI 142

Query: 152 LNSMKINNLCLSKFVTLLLKFISQRHRPVRGSALKQVMDYVRTYPCKTSF 3
           LN  K+ ++CLSKFV L+L+++SQR+RP+RGS  K ++ Y+RT PCKTSF
Sbjct: 143 LNPSKVTDICLSKFVALILQYVSQRNRPIRGSTSKLLLHYIRTVPCKTSF 192


>ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242283 [Vitis vinifera]
           gi|297738821|emb|CBI28066.3| unnamed protein product
           [Vitis vinifera]
          Length = 707

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/109 (63%), Positives = 85/109 (77%)
 Frame = -2

Query: 332 RNRIRKSLTNISSSIFKRELETVISACGRTRMYVDQFCHYLIKEAVTITTHGYAVVDLEI 153
           RNRIR SL N+ S  FK EL+ VISAC +TR YVDQ C  LI E V++   GYAV+DLEI
Sbjct: 284 RNRIRLSLRNLPSCTFKYELQAVISACRKTRAYVDQICSNLINEVVSVMAQGYAVIDLEI 343

Query: 152 LNSMKINNLCLSKFVTLLLKFISQRHRPVRGSALKQVMDYVRTYPCKTS 6
           L+  KI ++CLSKF+ L+L+FISQRHRPVRGS  K ++DY+RT+PCKTS
Sbjct: 344 LHPSKIEDICLSKFIALVLQFISQRHRPVRGSTSKLLLDYIRTFPCKTS 392


>ref|XP_002514295.1| raspberry3, putative [Ricinus communis] gi|223546751|gb|EEF48249.1|
           raspberry3, putative [Ricinus communis]
          Length = 679

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/109 (59%), Positives = 86/109 (78%)
 Frame = -2

Query: 332 RNRIRKSLTNISSSIFKRELETVISACGRTRMYVDQFCHYLIKEAVTITTHGYAVVDLEI 153
           RNRIR SL N+SS  FK EL+ VISAC +TR +VDQ C  LI +AVT+   GYA++DLEI
Sbjct: 260 RNRIRMSLGNLSSLTFKSELQAVISACRKTRAFVDQTCRNLINQAVTLIHQGYAIIDLEI 319

Query: 152 LNSMKINNLCLSKFVTLLLKFISQRHRPVRGSALKQVMDYVRTYPCKTS 6
           LN  K+ ++CL KF+ L+L+FISQR++PVRGSAL+ ++DY+ T+PCK S
Sbjct: 320 LNPSKVMDICLVKFLALVLQFISQRYKPVRGSALRLLLDYICTFPCKKS 368


>ref|XP_003529993.1| PREDICTED: uncharacterized protein LOC100818654 [Glycine max]
          Length = 710

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/109 (58%), Positives = 85/109 (77%)
 Frame = -2

Query: 332 RNRIRKSLTNISSSIFKRELETVISACGRTRMYVDQFCHYLIKEAVTITTHGYAVVDLEI 153
           RNRIR  L N+SSS FK EL+ +ISAC  TR YVDQ  + LI++AV I  HGY V+DL+I
Sbjct: 288 RNRIRMVLNNLSSSAFKFELQALISACRITRTYVDQIAYSLIRDAVVIKDHGYVVIDLQI 347

Query: 152 LNSMKINNLCLSKFVTLLLKFISQRHRPVRGSALKQVMDYVRTYPCKTS 6
           L  +K+ ++CL KF++L+L+F+SQR R +RGSALK +MDY+RT+PCK S
Sbjct: 348 LCPLKVEDICLMKFLSLILQFVSQRQRQIRGSALKLLMDYIRTFPCKNS 396


>ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777173 [Glycine max]
          Length = 705

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/109 (58%), Positives = 85/109 (77%)
 Frame = -2

Query: 332 RNRIRKSLTNISSSIFKRELETVISACGRTRMYVDQFCHYLIKEAVTITTHGYAVVDLEI 153
           RNRIR  L N+SSS FK EL+ +ISAC  TR YVDQ  + LI +AV I  HGYAV+DL+I
Sbjct: 289 RNRIRMVLNNLSSSTFKFELQALISACRITRTYVDQIGYSLIGDAVVIKDHGYAVIDLQI 348

Query: 152 LNSMKINNLCLSKFVTLLLKFISQRHRPVRGSALKQVMDYVRTYPCKTS 6
           L  +K+ ++CL KF++L+L+F+SQR R +RG+ALK +MDY+RT+PCK S
Sbjct: 349 LCPLKVEDICLMKFLSLVLQFVSQRQRQIRGNALKLLMDYIRTFPCKNS 397


Top