BLASTX nr result
ID: Cnidium21_contig00047633
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047633 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc... 71 1e-10 ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi... 69 5e-10 ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding... 64 1e-08 ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding... 63 3e-08 ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 >ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula] gi|355484738|gb|AES65941.1| WD repeat-containing protein [Medicago truncatula] Length = 991 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Frame = +1 Query: 1 QHSKYDDALDEDNEEES-NFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQ 177 +HS ++ LDED EE + FPK ESHKK + + ++N G + Sbjct: 369 KHSFSEENLDEDGEEYGIDLFPKVESHKKRNRSVKE--------------NLNNGSVGFR 414 Query: 178 STMVAAGPKLQEAFQPGATPVQPGKRRFL 264 STMV + K+QEAFQ GATPVQPGKRRFL Sbjct: 415 STMVTSKTKMQEAFQSGATPVQPGKRRFL 443 >ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis] gi|223543104|gb|EEF44638.1| WD-repeat protein, putative [Ricinus communis] Length = 775 Score = 68.6 bits (166), Expect = 5e-10 Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 QHSKYDD-ALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQ 177 +HS++D+ E +E N FPK E KK H D +D EGL+ Sbjct: 366 KHSEFDEEGAREHINDELNLFPKIEPRKKVHRVGKD--------------NMDKGNEGLR 411 Query: 178 STMVAAGPKLQEAFQPGATPVQPGKRRFL 264 ST + KLQEAFQPGATP QPGKRRFL Sbjct: 412 STATSTKSKLQEAFQPGATPAQPGKRRFL 440 >ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis sativus] Length = 962 Score = 64.3 bits (155), Expect = 1e-08 Identities = 36/88 (40%), Positives = 47/88 (53%) Frame = +1 Query: 1 QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180 +HS D+ LDE + E+ + FPK +S K H + D +DN EG Sbjct: 370 KHSTNDEILDEVDSEDFSLFPKLDSRKTSHRVKRD--------------KLDNVDEGAIG 415 Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264 + K QEAFQPGATP+QPGK+RFL Sbjct: 416 KATYSRVKQQEAFQPGATPLQPGKKRFL 443 >ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine max] Length = 994 Score = 62.8 bits (151), Expect = 3e-08 Identities = 35/88 (39%), Positives = 49/88 (55%) Frame = +1 Query: 1 QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180 +HS ++ L ED EE + K ++HKK + + +D+ G +S Sbjct: 367 KHSLSEENLGEDGGEEIVSYLKVDTHKKRNRSGKE--------------NLDSGNMGFRS 412 Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264 TMV + K+QEAFQPG+TPVQPGKR FL Sbjct: 413 TMVTSKAKMQEAFQPGSTPVQPGKRHFL 440 >ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|222858632|gb|EEE96179.1| predicted protein [Populus trichocarpa] Length = 534 Score = 59.3 bits (142), Expect = 3e-07 Identities = 36/88 (40%), Positives = 48/88 (54%) Frame = +1 Query: 1 QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180 + S+++D DED ++E + PK E KK H D + GL+S Sbjct: 249 KQSEFEDP-DEDIDDELSLLPKTEPRKKVHRASKDNL---------------DKGNGLRS 292 Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264 T+ +A K+QEAFQPGATP Q GKRRFL Sbjct: 293 TVTSARLKMQEAFQPGATPPQRGKRRFL 320