BLASTX nr result

ID: Cnidium21_contig00047633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047633
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...    71   1e-10
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...    69   5e-10
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...    64   1e-08
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...    63   3e-08
ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   QHSKYDDALDEDNEEES-NFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQ 177
           +HS  ++ LDED EE   + FPK ESHKK +    +               ++N   G +
Sbjct: 369 KHSFSEENLDEDGEEYGIDLFPKVESHKKRNRSVKE--------------NLNNGSVGFR 414

Query: 178 STMVAAGPKLQEAFQPGATPVQPGKRRFL 264
           STMV +  K+QEAFQ GATPVQPGKRRFL
Sbjct: 415 STMVTSKTKMQEAFQSGATPVQPGKRRFL 443


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/89 (44%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   QHSKYDD-ALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQ 177
           +HS++D+    E   +E N FPK E  KK H    D               +D   EGL+
Sbjct: 366 KHSEFDEEGAREHINDELNLFPKIEPRKKVHRVGKD--------------NMDKGNEGLR 411

Query: 178 STMVAAGPKLQEAFQPGATPVQPGKRRFL 264
           ST  +   KLQEAFQPGATP QPGKRRFL
Sbjct: 412 STATSTKSKLQEAFQPGATPAQPGKRRFL 440


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/88 (40%), Positives = 47/88 (53%)
 Frame = +1

Query: 1   QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180
           +HS  D+ LDE + E+ + FPK +S K  H  + D               +DN  EG   
Sbjct: 370 KHSTNDEILDEVDSEDFSLFPKLDSRKTSHRVKRD--------------KLDNVDEGAIG 415

Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264
               +  K QEAFQPGATP+QPGK+RFL
Sbjct: 416 KATYSRVKQQEAFQPGATPLQPGKKRFL 443


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/88 (39%), Positives = 49/88 (55%)
 Frame = +1

Query: 1   QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180
           +HS  ++ L ED  EE   + K ++HKK +    +               +D+   G +S
Sbjct: 367 KHSLSEENLGEDGGEEIVSYLKVDTHKKRNRSGKE--------------NLDSGNMGFRS 412

Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264
           TMV +  K+QEAFQPG+TPVQPGKR FL
Sbjct: 413 TMVTSKAKMQEAFQPGSTPVQPGKRHFL 440


>ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|222858632|gb|EEE96179.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/88 (40%), Positives = 48/88 (54%)
 Frame = +1

Query: 1   QHSKYDDALDEDNEEESNFFPKAESHKKPHEDEFDFFXXXXXXXXXXXXXVDNAKEGLQS 180
           + S+++D  DED ++E +  PK E  KK H    D                 +   GL+S
Sbjct: 249 KQSEFEDP-DEDIDDELSLLPKTEPRKKVHRASKDNL---------------DKGNGLRS 292

Query: 181 TMVAAGPKLQEAFQPGATPVQPGKRRFL 264
           T+ +A  K+QEAFQPGATP Q GKRRFL
Sbjct: 293 TVTSARLKMQEAFQPGATPPQRGKRRFL 320


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