BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047624
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]    95   5e-18
ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   3e-13
ref|NP_200948.1| pentatricopeptide repeat-containing protein [Ar...    77   1e-12
ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12

>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = -3

Query: 297 FLNTSISDLSGTSIDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPD 118
           FL  + +D +G+  +++D   C  N V YTALIQGLC DG+I KASK FS MR   LRPD
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590

Query: 117 VLSYYTITKGHKQVKDMRNVMVLQADMLKSGIIPD 13
           V +   I +GH +   +R+VM+LQAD+LK GIIP+
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/83 (32%), Positives = 49/83 (59%)
 Frame = -3

Query: 255 DQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQV 76
           D+M        VV YT LI+GLC + +IS+A  +F  MR   + P++ +Y T+  G+ ++
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 75  KDMRNVMVLQADMLKSGIIPDVL 7
             ++  + L  +ML  G++P+V+
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVV 299



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = -3

Query: 258 IDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQ 79
           + +M     L N VTY  LI G C++G + KA ++ S M    + P+++++ T+  G+ +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 78  VKDMRNVMVLQADMLKSGIIPDVL 7
              M   M L  +M+  G++PDV+
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVV 474


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/95 (51%), Positives = 65/95 (68%)
 Frame = -3

Query: 297 FLNTSISDLSGTSIDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPD 118
           FL  + +D +G+  +++D   C  N V YTALIQGLC DG+I KASK FS MR   LRPD
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590

Query: 117 VLSYYTITKGHKQVKDMRNVMVLQADMLKSGIIPD 13
           V +   I +GH +   +R+VM+LQAD+LK GIIP+
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/83 (32%), Positives = 49/83 (59%)
 Frame = -3

Query: 255 DQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQV 76
           D+M        VV YT LI+GLC + +IS+A  +F  MR   + P++ +Y T+  G+ ++
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 75  KDMRNVMVLQADMLKSGIIPDVL 7
             ++  + L  +ML  G++P+V+
Sbjct: 277 AHVKKALELYXEMLGDGLLPNVV 299



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = -3

Query: 258 IDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQ 79
           + +M     L N VTY  LI G C++G + KA ++ S M    + P+++++ T+  G+ +
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 78  VKDMRNVMVLQADMLKSGIIPDVL 7
              M   M L  +M+  G++PDV+
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVV 474


>ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)
 Frame = -3

Query: 255 DQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQV 76
           D+MD+  C  N + Y  LIQGLC DG I KA+K F+ M++   +PD+L Y T+ + H Q 
Sbjct: 379 DKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQS 438

Query: 75  KDMRNVMVLQADMLKSGIIPDVLL 4
           K M +VM+L ADM+K G+I +  +
Sbjct: 439 KHMIDVMMLHADMVKMGVIQNTFI 462


>ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g61400 gi|9757861|dbj|BAB08495.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010079|gb|AED97462.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/74 (47%), Positives = 54/74 (72%)
 Frame = -3

Query: 225 NVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQVKDMRNVMVLQ 46
           N V +T LI+GLC++G I +AS+ FS MR   + PD+ SY ++ KGH Q K + + M+LQ
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607

Query: 45  ADMLKSGIIPDVLL 4
            DM+K+GI+P++L+
Sbjct: 608 CDMIKTGILPNLLV 621


>ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
 Frame = -3

Query: 261 SIDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHK 82
           ++D   +   L N V YTALI GLC+DGQ SKA KLFS MR   L+PD + Y  + +G  
Sbjct: 532 NVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591

Query: 81  QVKDMRNVMVLQADMLKSGIIPD----VLLC 1
           QVK +  +M+L ADMLK G+IP+    V+LC
Sbjct: 592 QVKYI--LMMLHADMLKFGVIPNSAVHVILC 620



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/83 (34%), Positives = 50/83 (60%)
 Frame = -3

Query: 255 DQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQV 76
           D+M     +  V+ YT LI+GLC D +I +A  +  AMR + + P+V +Y T+  G+ ++
Sbjct: 206 DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKL 265

Query: 75  KDMRNVMVLQADMLKSGIIPDVL 7
            + +  + L  DML  G++PDV+
Sbjct: 266 ANAKQALRLYQDMLGEGLVPDVV 288



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/95 (28%), Positives = 59/95 (62%)
 Frame = -3

Query: 291 NTSISDLSGTSIDQMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVL 112
           + S ++ +G   ++M     LAN VTY +LI G C++G++ KA ++ S M    + P+V+
Sbjct: 369 SVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVI 428

Query: 111 SYYTITKGHKQVKDMRNVMVLQADMLKSGIIPDVL 7
           ++ T+  G+ ++++++  M + ++M+   + PDV+
Sbjct: 429 TFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVV 463



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/80 (33%), Positives = 43/80 (53%)
 Frame = -3

Query: 252 QMDNVSCLANVVTYTALIQGLCRDGQISKASKLFSAMRFLDLRPDVLSYYTITKGHKQVK 73
           QM       NV+T++ LI G C+   +  A  ++S M    L PDV++Y  +  GH +  
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476

Query: 72  DMRNVMVLQADMLKSGIIPD 13
            M+  + L +DML +GI P+
Sbjct: 477 SMKEALKLYSDMLDNGITPN 496