BLASTX nr result

ID: Cnidium21_contig00047578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047578
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    60   1e-07
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    60   2e-07
gb|ABI34316.1| S haplotype-specific F-box protein, putative [Sol...    59   3e-07
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    59   5e-07

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 44/139 (31%), Positives = 69/139 (49%)
 Frame = +1

Query: 1   IKAHLTISTNDPHFTRHRLLLITGPYMPSGEPDFYVNNYLFSLSVYSLLDDEDHSHVDKA 180
           +K HL +S+   HFT HR++L       +   +F++     S S+ SL ++   +  D  
Sbjct: 86  MKKHLHLSSRCTHFTHHRIIL------SATTAEFHLK----SCSLSSLFNNPSSTVCDDL 135

Query: 181 IQVYDPPMKYSEFIVGCCHGLVCLTTATIDEPVCVWNPSTRKSRTLPKLDVIKVNPRADT 360
                   ++ + IVG C+GL+C   A   + V +WNPS R S+  P L      P   T
Sbjct: 136 NYPVKNKFRH-DGIVGSCNGLLCF--AIKGDCVLLWNPSIRVSKKSPPLGN-NWRPGCFT 191

Query: 361 EYGFCYDESNDDFKVFAIF 417
            +G  YD  N+D+KV A+F
Sbjct: 192 AFGLGYDHVNEDYKVVAVF 210


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
 Frame = +1

Query: 1   IKAHLTISTNDPHFTRHRLLLITGPYMPSGEPDFYVNNYLFSLSVYSLLDDEDHSHVDKA 180
           +K HL +S+   HFT HR++L       +   +F    +L S S+ SL      +++   
Sbjct: 86  MKKHLHLSSRSTHFTHHRIIL------SATTAEF----HLKSCSLSSLF-----NNLSTV 130

Query: 181 IQVYDPPMKYS---EFIVGCCHGLVCLTTATIDEPVCVWNPSTRKSRTLPKLDVIKVNPR 351
               + P+K     + IVG C+GL+C   A   + V +WNPS R S+  P L      P 
Sbjct: 131 CDELNYPVKNKFRHDGIVGSCNGLLCF--AIKGDCVLLWNPSIRVSKKSPPLG-NNWRPG 187

Query: 352 ADTEYGFCYDESNDDFKVFAIF 417
             T +G  YD  N+D+KV A+F
Sbjct: 188 CFTAFGLGYDHVNEDYKVVAVF 209


>gb|ABI34316.1| S haplotype-specific F-box protein, putative [Solanum demissum]
          Length = 190

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
 Frame = +1

Query: 1   IKAHLTISTNDPHFTRHRLLLITGPYMPSGEPDFYVNNYLFSLSVYSLLDDEDHSHVDKA 180
           IK HL  + ND  ++ HR++            +F V        + S+L+ E  + +   
Sbjct: 46  IKNHLKQTANDKEYSHHRIIF------QESACNFKV------CCLRSMLNKEQSTELFDI 93

Query: 181 IQVYDPPMKYSEFIVGCCHGLVCLTTATIDEPVCVWNPSTRKSRTLPKLDV-IKVNPRAD 357
               + P  Y+ +IVG  +GL+CL +  I+E V +WNP+ +KS+ LP L   ++      
Sbjct: 94  GSPMENPSIYT-WIVGSVNGLICLYSK-IEETV-LWNPAVKKSKKLPTLGAKLRNGCSYY 150

Query: 358 TEYGFCYDESNDDFKVFAI---FGSSYKL 435
            +YGF YDE+ DD+KV  I   +  +YK+
Sbjct: 151 LKYGFGYDETRDDYKVVVIQCMYADNYKV 179


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 49/143 (34%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
 Frame = +1

Query: 1   IKAHL----TISTNDPHFTRHRLLLITGPYMPSGEPDFYVNNYLFSLSVYSLLDDEDHSH 168
           IK HL     +S NDP F+   ++        S EP F +     S S+YS+ ++     
Sbjct: 116 IKTHLEKVKNLSRNDPDFSPEIVI-------SSSEPLFRLK----SCSLYSVYNNPVTDA 164

Query: 169 VDKAIQVYDPPMKYSEFIVGCCHGLVCLTTATIDEPVCVWNPSTRKSRTLPKLDVIKVNP 348
           V     +     +Y +++VG C GLVCL      + V +WNPSTR    LP L   K   
Sbjct: 165 VVIDYYLLKDIYRY-DWVVGSCDGLVCLGIK--QDFVVLWNPSTRVFNRLPDLGFAK-KL 220

Query: 349 RADTEYGFCYDESNDDFKVFAIF 417
            + T +GF YD   DD+KV A+F
Sbjct: 221 GSYTVFGFGYDSQIDDYKVLAMF 243


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   IKAHLTISTNDPHFTRHRLLLITGPYMPSGEPDFYVNNYLFSLSVYSLLDDEDHSHVDKA 180
           IK HL +  ND  ++ HR++            +F V        + S+L+ E  + +   
Sbjct: 46  IKTHLELIANDKEYSHHRIIF------QESACNFKV------CCLPSMLNKERSTELFDI 93

Query: 181 IQVYDPPMKYSEFIVGCCHGLVCLTTATIDEPVCVWNPSTRKSRTLPKLDV-IKVNPRAD 357
               + P  Y+ +IVG  +GL+CL +  I+E V +WNP+ +KS+ LP L   ++      
Sbjct: 94  GSPMENPTIYT-WIVGSVNGLICLYSK-IEETV-LWNPAVKKSKKLPTLGAKLRNGCSYY 150

Query: 358 TEYGFCYDESNDDFKVFAI 414
            +YGF YDE+ DD+KV  I
Sbjct: 151 LKYGFGYDETRDDYKVVVI 169


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