BLASTX nr result

ID: Cnidium21_contig00047558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047558
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242...    60   5e-15
ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-11
ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp....    48   9e-11
ref|NP_001078541.1| uncharacterized protein [Arabidopsis thalian...    45   2e-10
ref|NP_001031848.1| uncharacterized protein [Arabidopsis thalian...    45   2e-10

>ref|XP_003633085.1| PREDICTED: uncharacterized protein LOC100242180 [Vitis vinifera]
           gi|297738488|emb|CBI27733.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score = 60.1 bits (144), Expect(3) = 5e-15
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +1

Query: 157 DIIVNSVMVGEQKVVFIPSFWSCLKLQQVSSPTDFKVIKRTNSGS 291
           D+I N V +GEQ ++F+PSF S +KLQQVSSP DF +I+RTN GS
Sbjct: 284 DLIENFVKIGEQTMLFLPSFKSFMKLQQVSSPIDFNIIERTNLGS 328



 Score = 35.4 bits (80), Expect(3) = 5e-15
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 309 FQGLCSALHSLDQGLVC 359
           FQGLCS L SLDQGLVC
Sbjct: 366 FQGLCSTLRSLDQGLVC 382



 Score = 29.6 bits (65), Expect(3) = 5e-15
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 50  FTVKRTCRCHGKPLDD 97
           F+  +TCRCHG PLDD
Sbjct: 247 FSPCQTCRCHGIPLDD 262


>ref|XP_002321771.1| predicted protein [Populus trichocarpa] gi|222868767|gb|EEF05898.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 57.8 bits (138), Expect(2) = 2e-11
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = +1

Query: 151 IPDIIVNSVMVGEQKVVFIPSFWSCLKLQQVSSPTDFKVIKRTNSGS 291
           I D+I NSV VG++ V+F+PSF S +KL+QVSSP DF +I+R N  S
Sbjct: 289 ISDVIENSVQVGDKTVLFMPSFQSSMKLKQVSSPIDFNIIERANLSS 335



 Score = 35.8 bits (81), Expect(2) = 2e-11
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 309 FQGLCSALHSLDQGLVC 359
           FQG+CS LHS+DQGL+C
Sbjct: 372 FQGICSVLHSMDQGLLC 388


>ref|XP_002871267.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317104|gb|EFH47526.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 646

 Score = 47.8 bits (112), Expect(3) = 9e-11
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +1

Query: 157 DIIVNSVMVGEQKVVFIPSFWSCLKLQQVSSPTDFKVIKRTN 282
           D+I NSV +G++ V+F+PS  S  KL  +SS  DF VI+RTN
Sbjct: 288 DVIENSVKIGDRTVLFLPSIHSLQKLHPISSQVDFHVIERTN 329



 Score = 35.4 bits (80), Expect(3) = 9e-11
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 309 FQGLCSALHSLDQGLVC 359
           FQGLC AL+S+DQGLVC
Sbjct: 370 FQGLCGALYSMDQGLVC 386



 Score = 27.3 bits (59), Expect(3) = 9e-11
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 50  FTVKRTCRCHGKPLDD 97
           F+  RTCRCHG PL D
Sbjct: 251 FSPCRTCRCHGFPLLD 266


>ref|NP_001078541.1| uncharacterized protein [Arabidopsis thaliana]
           gi|91806818|gb|ABE66136.1| hypothetical protein
           At5g07380 [Arabidopsis thaliana]
           gi|332003767|gb|AED91150.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 642

 Score = 45.4 bits (106), Expect(3) = 2e-10
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 157 DIIVNSVMVGEQKVVFIPSFWSCLKLQQVSSPTDFKVIKRTN 282
           D+I NSV VG +  +F+P+  S  KL  VSS  DF VI+RTN
Sbjct: 288 DVIENSVKVGNRTTLFLPTIHSLQKLHPVSSQVDFNVIERTN 329



 Score = 35.4 bits (80), Expect(3) = 2e-10
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 309 FQGLCSALHSLDQGLVC 359
           FQGLC AL+S+DQGLVC
Sbjct: 366 FQGLCGALYSMDQGLVC 382



 Score = 28.9 bits (63), Expect(3) = 2e-10
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 62  RTCRCHGKPLDDRHEQKNKRSCQLRCN 142
           +TCRCHG PL D  E+  ++   L+C+
Sbjct: 255 QTCRCHGIPLQDSVEKPTEK---LKCS 278


>ref|NP_001031848.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79508236|ref|NP_196355.2| uncharacterized protein
           [Arabidopsis thaliana] gi|55978831|gb|AAV68877.1|
           hypothetical protein AT5G07380 [Arabidopsis thaliana]
           gi|55978833|gb|AAV68878.1| hypothetical protein
           AT5G07380 [Arabidopsis thaliana]
           gi|61742743|gb|AAX55192.1| hypothetical protein
           At5g07380 [Arabidopsis thaliana]
           gi|332003765|gb|AED91148.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332003766|gb|AED91149.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 641

 Score = 45.4 bits (106), Expect(3) = 2e-10
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 157 DIIVNSVMVGEQKVVFIPSFWSCLKLQQVSSPTDFKVIKRTN 282
           D+I NSV VG +  +F+P+  S  KL  VSS  DF VI+RTN
Sbjct: 287 DVIENSVKVGNRTTLFLPTIHSLQKLHPVSSQVDFNVIERTN 328



 Score = 35.4 bits (80), Expect(3) = 2e-10
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 309 FQGLCSALHSLDQGLVC 359
           FQGLC AL+S+DQGLVC
Sbjct: 365 FQGLCGALYSMDQGLVC 381



 Score = 28.9 bits (63), Expect(3) = 2e-10
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 62  RTCRCHGKPLDDRHEQKNKRSCQLRCN 142
           +TCRCHG PL D  E+  ++   L+C+
Sbjct: 254 QTCRCHGIPLQDSVEKPTEK---LKCS 277


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