BLASTX nr result

ID: Cnidium21_contig00047511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047511
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250...   107   8e-22
emb|CBI31979.3| unnamed protein product [Vitis vinifera]              107   8e-22
gb|ABO93003.1| putative regulator of chromosome condensation RCC...    92   4e-17
gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]        92   4e-17
ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinu...    76   3e-12

>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/114 (56%), Positives = 80/114 (70%), Gaps = 10/114 (8%)
 Frame = +2

Query: 2   LKALIARGSYRKVKSELRSEAGTESIASESPHGR--RVSPSSAFFDQGDGQQTD------ 157
           LK LI+RG+YRK +SE+R +    SI+SESPH R  R+SPS +  D GD QQT       
Sbjct: 117 LKGLISRGNYRKWRSEIRDD----SISSESPHSRARRISPSLSSSDPGDTQQTQVTFENI 172

Query: 158 --SRLGKAFANIISYTAATKSSPQADSVNYSPTSVQSGGQDNANGRTSASETMR 313
             S LGKAF+++ISYTA+TKS  QA+SV  S +S+ SGG DN+NGRTSASE  R
Sbjct: 173 PQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFR 226


>emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/114 (56%), Positives = 80/114 (70%), Gaps = 10/114 (8%)
 Frame = +2

Query: 2   LKALIARGSYRKVKSELRSEAGTESIASESPHGR--RVSPSSAFFDQGDGQQTD------ 157
           LK LI+RG+YRK +SE+R +    SI+SESPH R  R+SPS +  D GD QQT       
Sbjct: 117 LKGLISRGNYRKWRSEIRDD----SISSESPHSRARRISPSLSSSDPGDTQQTQVTFENI 172

Query: 158 --SRLGKAFANIISYTAATKSSPQADSVNYSPTSVQSGGQDNANGRTSASETMR 313
             S LGKAF+++ISYTA+TKS  QA+SV  S +S+ SGG DN+NGRTSASE  R
Sbjct: 173 PQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFR 226


>gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/108 (46%), Positives = 75/108 (69%), Gaps = 4/108 (3%)
 Frame = +2

Query: 2   LKALIARGSYRKVKSELRSEAGTESIASESPHGRRVSPSSAFFDQGDGQQTDS----RLG 169
           LKA+I RG  RK K + RSE    ++ S+SPHG+RV+ S++  DQGD Q+T+S    RLG
Sbjct: 139 LKAIITRGRSRKGKYDARSE----TVFSDSPHGQRVTTSTSSIDQGDNQRTESLPQSRLG 194

Query: 170 KAFANIISYTAATKSSPQADSVNYSPTSVQSGGQDNANGRTSASETMR 313
           KA+A+II YTAA KS    ++ +++ +S+ +G  DN+N R+S ++T R
Sbjct: 195 KAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSSTADTFR 242


>gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/108 (46%), Positives = 75/108 (69%), Gaps = 4/108 (3%)
 Frame = +2

Query: 2   LKALIARGSYRKVKSELRSEAGTESIASESPHGRRVSPSSAFFDQGDGQQTDS----RLG 169
           LKA+I RG  RK K + RSE    ++ S+SPHG+RV+ S++  DQGD Q+T+S    RLG
Sbjct: 139 LKAIITRGRSRKGKYDARSE----TVFSDSPHGQRVTTSTSSIDQGDNQRTESLPQSRLG 194

Query: 170 KAFANIISYTAATKSSPQADSVNYSPTSVQSGGQDNANGRTSASETMR 313
           KA+A+II YTAA KS    ++ +++ +S+ +G  DN+N R+S ++T R
Sbjct: 195 KAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSSTADTFR 242


>ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223538286|gb|EEF39893.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1042

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
 Frame = +2

Query: 2   LKALIARGSYRKVKSELRSEAGTESIASESPH------GRRVSP---SSAFFDQGDGQQT 154
           LKALI RGSY+   S+ R E  +ES +S+SPH       R +SP   SS +   G G   
Sbjct: 117 LKALITRGSYQ---SKWRIEPRSESTSSDSPHIRTRRHSRSISPFVRSSLWHGDGQGSPV 173

Query: 155 ------DSRLGKAFANIISYTAATKSSPQADSVNYSPTSVQSGGQDNANGRTSASETMR 313
                  +RLGKAF +IISYTAA KS  +A+ ++   +S+ +   DN+NGRTS ++T+R
Sbjct: 174 PFESIPSNRLGKAFCDIISYTAAEKSPSRAELLSSPFSSLNAACVDNSNGRTSTADTVR 232


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