BLASTX nr result
ID: Cnidium21_contig00047478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047478 (296 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21 ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi... 105 3e-21 ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2... 105 5e-21 ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20 ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20 >ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like [Vitis vinifera] Length = 641 Score = 107 bits (267), Expect = 1e-21 Identities = 50/99 (50%), Positives = 73/99 (73%), Gaps = 1/99 (1%) Frame = -2 Query: 295 VNKAVGFFRDHI-LRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVS 119 V++AV FFR+ + L D+C+FNI++RG+C++G+ DKAF L N+M FGC PDV++ Sbjct: 218 VDEAVCFFREQMGLHGPF---DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVIT 274 Query: 118 YNILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 YN LINGFCR+ V R ++LL+E+ ++ PDVV+YTS Sbjct: 275 YNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313 Score = 68.2 bits (165), Expect = 7e-10 Identities = 31/79 (39%), Positives = 52/79 (65%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 PD T+ ++ G CK+G+ +KA +L N+M S G P+ ++NILINGF ++G++ A + Sbjct: 306 PDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENM 365 Query: 58 LREIQLQDQFPPDVVSYTS 2 E+ L PPD++++TS Sbjct: 366 YEEMLLLG-CPPDIITFTS 383 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/71 (36%), Positives = 42/71 (59%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 P+ TFNI++ G KVG+ A + +M GC PD++++ LI+G CR G V R+ +L Sbjct: 341 PNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKL 400 Query: 58 LREIQLQDQFP 26 E+ ++ P Sbjct: 401 WHELNARNLSP 411 >ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like [Glycine max] Length = 598 Score = 105 bits (263), Expect = 3e-21 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%) Frame = -2 Query: 286 AVGFFRDHI-LRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNI 110 AV FR+ I LR K P T T NI++RG+C+ GE D+AF LLND+ SFGCLPDV++YN Sbjct: 160 AVVLFRELIRLRYK---PVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNT 216 Query: 109 LINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 LI+G CRI V RA LL+E+ L +F PDVVSYT+ Sbjct: 217 LIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTT 252 >ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa] Length = 512 Score = 105 bits (261), Expect = 5e-21 Identities = 49/98 (50%), Positives = 69/98 (70%) Frame = -2 Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116 V++A+ F+++++ PDT TFNI++RG+C+VG D+AF + DM SFGCLPDVV+Y Sbjct: 159 VHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTY 216 Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 N LING C+ V R EL +EIQ + PD+V+YTS Sbjct: 217 NTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254 Score = 61.2 bits (147), Expect = 8e-08 Identities = 34/98 (34%), Positives = 56/98 (57%) Frame = -2 Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116 V + F++ RS C PD T+ ++ G CK G+ +A L +M G P+V+++ Sbjct: 229 VQRGCELFKEIQSRSDCS-PDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITF 287 Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 N+LI+GF +IGN+ A + R++ D DVV++TS Sbjct: 288 NVLIDGFGKIGNIAEAEAMYRKMAYFD-CSADVVTFTS 324 >ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like [Cucumis sativus] Length = 548 Score = 103 bits (258), Expect = 1e-20 Identities = 47/98 (47%), Positives = 68/98 (69%) Frame = -2 Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116 V++AV FR+H+ PD +FNI++RG+C++GE DKAF +M +FGC PD+VSY Sbjct: 195 VDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252 Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 N LINGFCR+ + + ++LL+E L PDV++YTS Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/77 (38%), Positives = 48/77 (62%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 P+ TFN+++ G KVG A V+ M GCLPDVV++ LI+G+CR G V + +L Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377 Query: 58 LREIQLQDQFPPDVVSY 8 E+++++ P+V +Y Sbjct: 378 WEEMKVRN-LSPNVYTY 393 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/79 (36%), Positives = 49/79 (62%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 PD T+ ++ G CK+G+ A L ++M S G P+ ++N+LI+GF ++GN+ R+ + Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM-RSAMV 341 Query: 58 LREIQLQDQFPPDVVSYTS 2 + E L PDVV++TS Sbjct: 342 MYEKMLLLGCLPDVVTFTS 360 >ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like [Cucumis sativus] Length = 548 Score = 103 bits (258), Expect = 1e-20 Identities = 47/98 (47%), Positives = 68/98 (69%) Frame = -2 Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116 V++AV FR+H+ PD +FNI++RG+C++GE DKAF +M +FGC PD+VSY Sbjct: 195 VDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252 Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2 N LINGFCR+ + + ++LL+E L PDV++YTS Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/77 (38%), Positives = 48/77 (62%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 P+ TFN+++ G KVG A V+ M GCLPDVV++ LI+G+CR G V + +L Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377 Query: 58 LREIQLQDQFPPDVVSY 8 E+++++ P+V +Y Sbjct: 378 WEEMKVRN-LSPNVYTY 393 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/79 (36%), Positives = 49/79 (62%) Frame = -2 Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59 PD T+ ++ G CK+G+ A L ++M S G P+ ++N+LI+GF ++GN+ R+ + Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM-RSAMV 341 Query: 58 LREIQLQDQFPPDVVSYTS 2 + E L PDVV++TS Sbjct: 342 MYEKMLLLGCLPDVVTFTS 360