BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047478
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20

>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/99 (50%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 VNKAVGFFRDHI-LRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVS 119
           V++AV FFR+ + L       D+C+FNI++RG+C++G+ DKAF L N+M  FGC PDV++
Sbjct: 218 VDEAVCFFREQMGLHGPF---DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVIT 274

Query: 118 YNILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           YN LINGFCR+  V R ++LL+E+  ++   PDVV+YTS
Sbjct: 275 YNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/79 (39%), Positives = 52/79 (65%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           PD  T+  ++ G CK+G+ +KA +L N+M S G  P+  ++NILINGF ++G++  A  +
Sbjct: 306 PDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENM 365

Query: 58  LREIQLQDQFPPDVVSYTS 2
             E+ L    PPD++++TS
Sbjct: 366 YEEMLLLG-CPPDIITFTS 383



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/71 (36%), Positives = 42/71 (59%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           P+  TFNI++ G  KVG+   A  +  +M   GC PD++++  LI+G CR G V R+ +L
Sbjct: 341 PNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKL 400

Query: 58  LREIQLQDQFP 26
             E+  ++  P
Sbjct: 401 WHELNARNLSP 411


>ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -2

Query: 286 AVGFFRDHI-LRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNI 110
           AV  FR+ I LR K   P T T NI++RG+C+ GE D+AF LLND+ SFGCLPDV++YN 
Sbjct: 160 AVVLFRELIRLRYK---PVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNT 216

Query: 109 LINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           LI+G CRI  V RA  LL+E+ L  +F PDVVSYT+
Sbjct: 217 LIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTT 252


>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/98 (50%), Positives = 69/98 (70%)
 Frame = -2

Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116
           V++A+  F+++++      PDT TFNI++RG+C+VG  D+AF +  DM SFGCLPDVV+Y
Sbjct: 159 VHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTY 216

Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           N LING C+   V R  EL +EIQ +    PD+V+YTS
Sbjct: 217 NTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/98 (34%), Positives = 56/98 (57%)
 Frame = -2

Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116
           V +    F++   RS C  PD  T+  ++ G CK G+  +A  L  +M   G  P+V+++
Sbjct: 229 VQRGCELFKEIQSRSDCS-PDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITF 287

Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           N+LI+GF +IGN+  A  + R++   D    DVV++TS
Sbjct: 288 NVLIDGFGKIGNIAEAEAMYRKMAYFD-CSADVVTFTS 324


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/98 (47%), Positives = 68/98 (69%)
 Frame = -2

Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116
           V++AV  FR+H+       PD  +FNI++RG+C++GE DKAF    +M +FGC PD+VSY
Sbjct: 195 VDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252

Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           N LINGFCR+  + + ++LL+E  L     PDV++YTS
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 48/77 (62%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           P+  TFN+++ G  KVG    A V+   M   GCLPDVV++  LI+G+CR G V +  +L
Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377

Query: 58  LREIQLQDQFPPDVVSY 8
             E+++++   P+V +Y
Sbjct: 378 WEEMKVRN-LSPNVYTY 393



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           PD  T+  ++ G CK+G+   A  L ++M S G  P+  ++N+LI+GF ++GN+ R+  +
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM-RSAMV 341

Query: 58  LREIQLQDQFPPDVVSYTS 2
           + E  L     PDVV++TS
Sbjct: 342 MYEKMLLLGCLPDVVTFTS 360


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/98 (47%), Positives = 68/98 (69%)
 Frame = -2

Query: 295 VNKAVGFFRDHILRSKCCCPDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSY 116
           V++AV  FR+H+       PD  +FNI++RG+C++GE DKAF    +M +FGC PD+VSY
Sbjct: 195 VDEAVLLFREHL--EPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252

Query: 115 NILINGFCRIGNVFRAYELLREIQLQDQFPPDVVSYTS 2
           N LINGFCR+  + + ++LL+E  L     PDV++YTS
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/77 (38%), Positives = 48/77 (62%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           P+  TFN+++ G  KVG    A V+   M   GCLPDVV++  LI+G+CR G V +  +L
Sbjct: 318 PNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKL 377

Query: 58  LREIQLQDQFPPDVVSY 8
             E+++++   P+V +Y
Sbjct: 378 WEEMKVRN-LSPNVYTY 393



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/79 (36%), Positives = 49/79 (62%)
 Frame = -2

Query: 238 PDTCTFNIVLRGMCKVGEPDKAFVLLNDMNSFGCLPDVVSYNILINGFCRIGNVFRAYEL 59
           PD  T+  ++ G CK+G+   A  L ++M S G  P+  ++N+LI+GF ++GN+ R+  +
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNM-RSAMV 341

Query: 58  LREIQLQDQFPPDVVSYTS 2
           + E  L     PDVV++TS
Sbjct: 342 MYEKMLLLGCLPDVVTFTS 360