BLASTX nr result
ID: Cnidium21_contig00047461
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047461 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A... 77 2e-12 ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 76 2e-12 ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 74 9e-12 gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 74 9e-12 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 87.0 bits (214), Expect = 1e-15 Identities = 35/101 (34%), Positives = 57/101 (56%) Frame = -2 Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127 + W SL + P + + + +M SFLW G+ +KVAW+ CLPK EGGL ++ + +W Sbjct: 110 VYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEW 169 Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTMKTP 4 N+ ++ +W + +W W+ L+ R FWT+KTP Sbjct: 170 NKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTP 210 >ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis sativus] Length = 265 Score = 76.6 bits (187), Expect = 2e-12 Identities = 38/96 (39%), Positives = 50/96 (52%) Frame = -2 Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127 + W S+ M P + R + ++ S+ W G RG KVAW+ CLP EGGL +RD W Sbjct: 93 VYWASVFMLPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSSW 152 Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFW 19 N AS LW +L LW+ WV LK R+ W Sbjct: 153 NIASTLKILWLLLVKSGS-LWVAWVEAYILKGRSLW 187 >ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial [Cucumis sativus] Length = 647 Score = 76.3 bits (186), Expect = 2e-12 Identities = 38/102 (37%), Positives = 55/102 (53%) Frame = -2 Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127 + W S+ M P + + + ++ S+LW G RG +KVAW+ CLP EGGL++ D W Sbjct: 275 VYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSW 334 Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTMKTPA 1 N+AS LW +L LW+ WV LK R+ W + A Sbjct: 335 NKASTLKILWLLLVKSGS-LWVAWVEAYILKGRSLWEIDAGA 375 >ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis sativus] Length = 382 Score = 74.3 bits (181), Expect = 9e-12 Identities = 38/94 (40%), Positives = 52/94 (55%) Frame = -2 Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127 + W S+ M P + R + ++ S+LW G RG +KVAW+ CLP EGGL++RD W Sbjct: 90 VYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSW 149 Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRA 25 N AS LW +L LW+ WV LK R+ Sbjct: 150 NIASTLKILWLLLVKSGS-LWVAWVEAYILKGRS 182 >gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana] Length = 629 Score = 74.3 bits (181), Expect = 9e-12 Identities = 35/96 (36%), Positives = 52/96 (54%) Frame = -2 Query: 300 WESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQWNQ 121 W S P+ + + ++ +FLW G HR +KV+W+ C PK EGGL LR L + N Sbjct: 230 WMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANV 289 Query: 120 ASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTM 13 SV +WR+ D LW++W LK +FW++ Sbjct: 290 VSVLKLIWRVTSN-DDSLWVKWSKMNLLKQESFWSL 324