BLASTX nr result

ID: Cnidium21_contig00047461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047461
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...    77   2e-12
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A...    76   2e-12
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    74   9e-12
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    74   9e-12

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 35/101 (34%), Positives = 57/101 (56%)
 Frame = -2

Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127
           + W SL + P  + + +  +M SFLW G+      +KVAW+  CLPK EGGL ++ + +W
Sbjct: 110 VYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEW 169

Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTMKTP 4
           N+ ++   +W +       +W  W+    L+ R FWT+KTP
Sbjct: 170 NKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTP 210


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/96 (39%), Positives = 50/96 (52%)
 Frame = -2

Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127
           + W S+ M P  + R +  ++ S+ W G    RG  KVAW+  CLP  EGGL +RD   W
Sbjct: 93  VYWASVFMLPMKVHRDVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSSW 152

Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFW 19
           N AS    LW +L      LW+ WV    LK R+ W
Sbjct: 153 NIASTLKILWLLLVKSGS-LWVAWVEAYILKGRSLW 187


>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
           [Cucumis sativus]
          Length = 647

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/102 (37%), Positives = 55/102 (53%)
 Frame = -2

Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127
           + W S+ M P  + + +  ++ S+LW G    RG +KVAW+  CLP  EGGL++ D   W
Sbjct: 275 VYWASVFMLPMKVHKDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAICDGSSW 334

Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTMKTPA 1
           N+AS    LW +L      LW+ WV    LK R+ W +   A
Sbjct: 335 NKASTLKILWLLLVKSGS-LWVAWVEAYILKGRSLWEIDAGA 375


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/94 (40%), Positives = 52/94 (55%)
 Frame = -2

Query: 306 IVWESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQW 127
           + W S+ M P  + R +  ++ S+LW G    RG +KVAW+  CLP  EGGL++RD   W
Sbjct: 90  VYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSW 149

Query: 126 NQASVCYQLWRILQPCHDILWLRWVCCVFLKNRA 25
           N AS    LW +L      LW+ WV    LK R+
Sbjct: 150 NIASTLKILWLLLVKSGS-LWVAWVEAYILKGRS 182


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/96 (36%), Positives = 52/96 (54%)
 Frame = -2

Query: 300 WESLIMRPTGIPRMMLALMVSFLWGGTSNHRGISKVAWNTCCLPKSEGGLSLRDLLQWNQ 121
           W S    P+   + + ++  +FLW G   HR  +KV+W+  C PK EGGL LR L + N 
Sbjct: 230 WMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANV 289

Query: 120 ASVCYQLWRILQPCHDILWLRWVCCVFLKNRAFWTM 13
            SV   +WR+     D LW++W     LK  +FW++
Sbjct: 290 VSVLKLIWRVTSN-DDSLWVKWSKMNLLKQESFWSL 324


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