BLASTX nr result

ID: Cnidium21_contig00047452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047452
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28040.3| unnamed protein product [Vitis vinifera]              105   3e-21
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]   105   3e-21
ref|XP_002325006.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...    92   3e-17
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig...    92   3e-17

>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = -2

Query: 411  MEVSSDLIYLGCKGGIVEVWCRKKLDRKETLQTGTNGKVLCMALDSDEEVLVIGTSNGRI 232
            + VSS+LIYLG K G VE+WCRKKL R ETLQTGTNGKV CMA+D DEEVLV+GTS+GRI
Sbjct: 1089 LAVSSELIYLGSKSGTVEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRI 1148

Query: 231  QAWGL 217
            QAW L
Sbjct: 1149 QAWEL 1153


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = -2

Query: 411  MEVSSDLIYLGCKGGIVEVWCRKKLDRKETLQTGTNGKVLCMALDSDEEVLVIGTSNGRI 232
            + VSS+LIYLG K G VE+WCRKKL R ETLQTGTNGKV CMA+D DEEVLV+GTS+GRI
Sbjct: 1553 LAVSSELIYLGSKSGTVEIWCRKKLIRVETLQTGTNGKVQCMAVDGDEEVLVVGTSDGRI 1612

Query: 231  QAWGL 217
            QAW L
Sbjct: 1613 QAWEL 1617


>ref|XP_002325006.1| predicted protein [Populus trichocarpa] gi|222866440|gb|EEF03571.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/66 (71%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 411 MEVSSDLIYLGCKGGIVEVWCRKKL-DRKETLQTGTNGKVLCMALDSDEEVLVIGTSNGR 235
           M +SSDLIY+GCK G VE+W RKK  +R E LQTGTN KVLCMAL+++E+VLVIGTS G+
Sbjct: 279 MAISSDLIYVGCKAGTVEIWDRKKQQNRVEILQTGTNDKVLCMALNANEDVLVIGTSTGQ 338

Query: 234 IQAWGL 217
           IQAWGL
Sbjct: 339 IQAWGL 344


>ref|XP_004155724.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
            LIN-2-like [Cucumis sativus]
          Length = 1230

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = -2

Query: 411  MEVSSDLIYLGCKGGIVEVWCRKKLDRKETLQTGTNGKVLCMALDSDEEVLVIGTSNGRI 232
            M VSSDL YLG KGG+VE+W R+K ++ +TLQ G N K++CMALD  EEVLVIGTS+GRI
Sbjct: 1166 MAVSSDLTYLGGKGGMVEIWSREKHNKIDTLQMGRNCKIVCMALDEREEVLVIGTSDGRI 1225

Query: 231  QAWGL 217
            Q WGL
Sbjct: 1226 QGWGL 1230


>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
            sativus]
          Length = 1336

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = -2

Query: 411  MEVSSDLIYLGCKGGIVEVWCRKKLDRKETLQTGTNGKVLCMALDSDEEVLVIGTSNGRI 232
            M VSSDL YLG KGG+VE+W R+K ++ +TLQ G N K++CMALD  EEVLVIGTS+GRI
Sbjct: 1272 MAVSSDLTYLGGKGGMVEIWSREKHNKIDTLQMGRNCKIVCMALDEREEVLVIGTSDGRI 1331

Query: 231  QAWGL 217
            Q WGL
Sbjct: 1332 QGWGL 1336


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