BLASTX nr result

ID: Cnidium21_contig00047448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047448
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    89   3e-16
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003603397.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   3e-12
ref|XP_003603386.1| FBD-associated F-box protein [Medicago trunc...    76   3e-12
ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    73   2e-11

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 58/154 (37%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
 Frame = -3

Query: 500 LKGILLTCTDLLQFMESAKNYKLPMFHNLARLELGANKEAGWDLLVLLLESTPNLEVLVF 321
           +K + LT   L     +  +YKLP FHN+ RLE        WD L   L S+PNLE LV 
Sbjct: 306 VKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVI 365

Query: 320 PRGLVKRVSSPKKPYFEFQWYPPESVPGCLLLSLETIIIHDFFGKNCEIDLVEYLLENAK 141
             G    +           W  P  VP CL+L L+ I I    G++ E++ VEYLL+NA+
Sbjct: 366 ETGYTNELIPEG-------WLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAE 418

Query: 140 VLKQMTI--YFLYFKRQESCQRNLLRCQRGSPTC 45
           VL+QMTI  +  Y  ++    + LL   RGS +C
Sbjct: 419 VLQQMTIDCHESYMDQEFCVCKKLLGLPRGSRSC 452


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/155 (34%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
 Frame = -3

Query: 476 TDLLQFMESAKNYKLPM------FHNLARLELGANKEAGWDLLVLLLESTPNLEVLVFPR 315
           T  LQ +  A + KLP       F NL RLE+ A+    W +L  +L+ +P LEV +  +
Sbjct: 313 TSPLQTLSDAVHKKLPCVGNLPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFILYK 372

Query: 314 GLVKRVSSPKKPYFEFQWYPPESVPGCLLLSLETIIIHDFFGKNCEIDLVEYLLENAKVL 135
                 S+ K P    +W  PE VP CL  SL+ I    F  +  EI++ EYL++NA VL
Sbjct: 373 D-----STEKTP----RWRNPEFVPRCLRSSLKVIEYVGFESELGEIEMAEYLIKNALVL 423

Query: 134 KQMTIYF---LYFKRQESCQRNLLRCQRGSPTCKL 39
           ++MTI +   +    +E     L  C+RGS  C++
Sbjct: 424 EKMTIEYGWKMIHDFKERVAERLTECRRGSTACRI 458


>ref|XP_003603397.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355492445|gb|AES73648.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 430

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
 Frame = -3

Query: 467 LQFMESAKNYK----LPMFHNLARLELGANKEAGWDLLVLLLESTPNLEVLVFPRGLVKR 300
           L F+E  K Y+    +P FHNL  L L  +  + W LL  +L   PNL+ +   +G    
Sbjct: 242 LLFIEINKVYRGCDEIPTFHNLTTLAL-YSINSNWHLLAQVLNHCPNLQNIELSQGTHNE 300

Query: 299 VSSPKKPYFEFQWYPPESVPGCLLLSLETIIIHDFFGKNCEIDLVEYLLENAKVLKQMTI 120
           +        E  W  P SVP CL L L+T  I  F G+  E+ L +++L+NA+VL+ M I
Sbjct: 301 IIEG----VEENWEDPISVPHCLSLKLQTCSILKFLGQESELLLAKHILKNARVLQTMKI 356

Query: 119 YFLYFKRQESCQRNLLRCQRGSPTCKLELILKDG 18
                 ++    R LL C R SP C++ +  K G
Sbjct: 357 ---NCGKELKTYRELLLCPRASPICEVVIDCKRG 387


>ref|XP_003603386.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355492434|gb|AES73637.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 206

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
 Frame = -3

Query: 467 LQFMESAKNYK----LPMFHNLARLELGANKEAGWDLLVLLLESTPNLEVLVFPRGLVKR 300
           L F+E  K Y+    +P FHNL  L L  +  + W LL  +L   PNL+ +   +G    
Sbjct: 18  LLFIEINKVYRGCDEIPTFHNLTTLAL-YSINSNWHLLAQVLNHCPNLQNIELSQGTHNE 76

Query: 299 VSSPKKPYFEFQWYPPESVPGCLLLSLETIIIHDFFGKNCEIDLVEYLLENAKVLKQMTI 120
           +        E  W  P SVP CL L L+T  I  F G+  E+ L +++L+NA+VL+ M I
Sbjct: 77  IIEG----VEENWEDPISVPHCLSLKLQTCSILKFLGQESELLLAKHILKNARVLQTMKI 132

Query: 119 YFLYFKRQESCQRNLLRCQRGSPTCKLELILKDG 18
                 ++    R LL C R SP C++ +  K G
Sbjct: 133 ---NCGKELKTYRELLLCPRASPICEVVIDCKRG 163


>ref|XP_003603394.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355492442|gb|AES73645.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 470

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/135 (34%), Positives = 74/135 (54%)
 Frame = -3

Query: 437 KLPMFHNLARLELGANKEAGWDLLVLLLESTPNLEVLVFPRGLVKRVSSPKKPYFEFQWY 258
           ++P FHNL +L+L +   + W+LLV +L   P LE L    G     +  ++ + +  W 
Sbjct: 333 EIPTFHNLTKLKLHSIN-SNWNLLVQVLNHCPKLENLELDEGS----TIDRRLHVQKNWK 387

Query: 257 PPESVPGCLLLSLETIIIHDFFGKNCEIDLVEYLLENAKVLKQMTIYFLYFKRQESCQRN 78
            P+ VP CL L L+T I  +F G+  E+    Y+L+NA+VL+ M+I  +   +    +R 
Sbjct: 388 DPKFVPQCLSLHLKTCIFQNFIGQQGELMSTIYILKNARVLQTMSICGV---KALEVERE 444

Query: 77  LLRCQRGSPTCKLEL 33
           L  C R SP C++ L
Sbjct: 445 LSLCPRVSPICEVIL 459


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