BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047442
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                92   3e-17
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    91   7e-17
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      88   6e-16
emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]    87   1e-15
emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera]    87   2e-15

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/123 (39%), Positives = 71/123 (57%)
 Frame = -1

Query: 472  LEITHVSPRVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFF 293
            +EI   S R +  + D NKE + + LDLI+E+RD+   R    + +A+  YN +VK R +
Sbjct: 1737 VEIGEPSLRRQTLDLDLNKESLLVGLDLINELRDKCKIREEACKIRAARRYNSKVKPRSY 1796

Query: 292  HQDDLVLRKIEASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLK 113
             + DLV R + +      GK + NWEGP+R+      G+Y LE L G   PRTW+A +LK
Sbjct: 1797 QKGDLVWR-MRSDARKDGGKFSSNWEGPFRISNTATGGAYYLEYLSGKSAPRTWNATHLK 1855

Query: 112  IYY 104
             YY
Sbjct: 1856 FYY 1858


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
 Frame = -1

Query: 397  LDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLRKIEASGVGQK-GKLAPN 221
            LD ++E RD+A  R   +Q+ A+ +YN +VK R F + DLVLRK+  + V Q  GKL  +
Sbjct: 1688 LDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAH 1747

Query: 220  WEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYY 104
            WEGPY + +V   G Y+L T++G  +PR+W++ NLK YY
Sbjct: 1748 WEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -1

Query: 448  RVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLR 269
            R   F   +N+EG++ +LDL++E RD A      +Q +    YN RV +R     DLVLR
Sbjct: 1191 RTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRAYNHRVHKRDLRVGDLVLR 1250

Query: 268  KIEASGVGQ-KGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYYV 101
            K  A+  G   GK+  NWEGPY+V E    G+Y+L  +EGV +   W+  NL+ Y++
Sbjct: 1251 KSTATNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYFI 1307


>emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]
          Length = 973

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
 Frame = -1

Query: 469  EITHVSPRVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFH 290
            EI   S R EA + D     +   LD  DEVR+ A+ R  ++Q++AS +YN +V+ R F 
Sbjct: 850  EIRLPSIRTEAAKQDDANAELGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRSFK 909

Query: 289  QDDLVLRKI-EASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLK 113
               LVLRK+ E +     GK   NWEGPY V +    G+Y L+ L+G  + R W+  NLK
Sbjct: 910  NGTLVLRKVFENTAETGAGKFQANWEGPYIVSKSSESGAYHLQKLDGTPLLRPWNVSNLK 969

Query: 112  IYY 104
             YY
Sbjct: 970  QYY 972


>emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera]
          Length = 1000

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
 Frame = -1

Query: 439  AFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLRKI- 263
            A ++D N E  R  LD  DEVR+ A  R  ++Q++AS +YN +V+ R F    LVLRK+ 
Sbjct: 888  AKQSDANIE-FRRNLDWTDEVRESAAIRMADYQQRASAHYNRKVRPRSFKNGTLVLRKVF 946

Query: 262  -EASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYY 104
               + VG  GK   NWEGPY V +  G G+Y L+ L+G  + R W+  NLK YY
Sbjct: 947  ENTTEVGA-GKFQANWEGPYIVSKANGNGAYHLQKLDGTPLLRPWNVSNLKQYY 999