BLASTX nr result
ID: Cnidium21_contig00047442
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00047442 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] 92 3e-17 gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 91 7e-17 gb|AAY99339.1| pol-polyprotein [Silene latifolia] 88 6e-16 emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera] 87 1e-15 emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera] 87 2e-15 >gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris] Length = 1859 Score = 92.4 bits (228), Expect = 3e-17 Identities = 49/123 (39%), Positives = 71/123 (57%) Frame = -1 Query: 472 LEITHVSPRVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFF 293 +EI S R + + D NKE + + LDLI+E+RD+ R + +A+ YN +VK R + Sbjct: 1737 VEIGEPSLRRQTLDLDLNKESLLVGLDLINELRDKCKIREEACKIRAARRYNSKVKPRSY 1796 Query: 292 HQDDLVLRKIEASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLK 113 + DLV R + + GK + NWEGP+R+ G+Y LE L G PRTW+A +LK Sbjct: 1797 QKGDLVWR-MRSDARKDGGKFSSNWEGPFRISNTATGGAYYLEYLSGKSAPRTWNATHLK 1855 Query: 112 IYY 104 YY Sbjct: 1856 FYY 1858 >gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1787 Score = 91.3 bits (225), Expect = 7e-17 Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Frame = -1 Query: 397 LDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLRKIEASGVGQK-GKLAPN 221 LD ++E RD+A R +Q+ A+ +YN +VK R F + DLVLRK+ + V Q GKL + Sbjct: 1688 LDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAH 1747 Query: 220 WEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYY 104 WEGPY + +V G Y+L T++G +PR+W++ NLK YY Sbjct: 1748 WEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786 >gb|AAY99339.1| pol-polyprotein [Silene latifolia] Length = 1307 Score = 88.2 bits (217), Expect = 6e-16 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 1/117 (0%) Frame = -1 Query: 448 RVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLR 269 R F +N+EG++ +LDL++E RD A +Q + YN RV +R DLVLR Sbjct: 1191 RTATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRAYNHRVHKRDLRVGDLVLR 1250 Query: 268 KIEASGVGQ-KGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYYV 101 K A+ G GK+ NWEGPY+V E G+Y+L +EGV + W+ NL+ Y++ Sbjct: 1251 KSTATNKGNIHGKMTTNWEGPYKVVEEMRPGTYRLTDMEGVPLMSHWNTDNLRKYFI 1307 >emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera] Length = 973 Score = 87.0 bits (214), Expect = 1e-15 Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Frame = -1 Query: 469 EITHVSPRVEAFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFH 290 EI S R EA + D + LD DEVR+ A+ R ++Q++AS +YN +V+ R F Sbjct: 850 EIRLPSIRTEAAKQDDANAELGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRSFK 909 Query: 289 QDDLVLRKI-EASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLK 113 LVLRK+ E + GK NWEGPY V + G+Y L+ L+G + R W+ NLK Sbjct: 910 NGTLVLRKVFENTAETGAGKFQANWEGPYIVSKSSESGAYHLQKLDGTPLLRPWNVSNLK 969 Query: 112 IYY 104 YY Sbjct: 970 QYY 972 >emb|CAN79085.1| hypothetical protein VITISV_027044 [Vitis vinifera] Length = 1000 Score = 86.7 bits (213), Expect = 2e-15 Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 2/114 (1%) Frame = -1 Query: 439 AFEADKNKEGMRLALDLIDEVRDEANARNIEHQKKASFYYNLRVKERFFHQDDLVLRKI- 263 A ++D N E R LD DEVR+ A R ++Q++AS +YN +V+ R F LVLRK+ Sbjct: 888 AKQSDANIE-FRRNLDWTDEVRESAAIRMADYQQRASAHYNRKVRPRSFKNGTLVLRKVF 946 Query: 262 -EASGVGQKGKLAPNWEGPYRVKEVFGRGSYKLETLEGVEVPRTWHAINLKIYY 104 + VG GK NWEGPY V + G G+Y L+ L+G + R W+ NLK YY Sbjct: 947 ENTTEVGA-GKFQANWEGPYIVSKANGNGAYHLQKLDGTPLLRPWNVSNLKQYY 999