BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047436
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   142   3e-32
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   142   3e-32
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   129   2e-28
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   125   3e-27
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   115   3e-24

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/137 (47%), Positives = 95/137 (69%)
 Frame = +2

Query: 2   LSAMIRCNETAGLIHGCTIARGAPTISHLLFADDCYFFFKAVEAEANVMKRILCRYEEMS 181
           LSA+++  E  G++HGC++ARGA T+ HL FADD Y FFKA E+E+  +K+IL RY+ +S
Sbjct: 119 LSALLKQGERCGVLHGCSVARGASTVLHLFFADDLYLFFKATESESRSLKQILLRYQNLS 178

Query: 182 GQTINLNKSTIVFSPNTGVEERRGVCEQLGVKEVNNSGNYLGMPMTVGRRKVSTFKFLLE 361
           GQ INLNKS + FS NT    +RG+C  L V+E  + G YLGMP  VG+ K   F+F+  
Sbjct: 179 GQEINLNKSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRR 238

Query: 362 RIEQKLQIWGNQKISKA 412
           ++  ++Q W  +++S+A
Sbjct: 239 KVWNRIQNWNGRRLSRA 255


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/137 (46%), Positives = 95/137 (69%)
 Frame = +2

Query: 2    LSAMIRCNETAGLIHGCTIARGAPTISHLLFADDCYFFFKAVEAEANVMKRILCRYEEMS 181
            LSA+++  E  G++HGC++ARGAP +SHL FAD+ Y FFKA E+E+  +K+IL RY+ +S
Sbjct: 1206 LSALLKQGERCGVLHGCSVARGAPXVSHLFFADBSYLFFKATESESRSLKQILLRYQNLS 1265

Query: 182  GQTINLNKSTIVFSPNTGVEERRGVCEQLGVKEVNNSGNYLGMPMTVGRRKVSTFKFLLE 361
            GQ INLNK  + FS NT    +RG+C  L V+E  + G YLGMP  VG+ K   F+F+  
Sbjct: 1266 GQEINLNKXALTFSRNTDDVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRR 1325

Query: 362  RIEQKLQIWGNQKISKA 412
            ++  ++Q W  +++S+A
Sbjct: 1326 KVWNRIQNWNGRRLSRA 1342


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/137 (46%), Positives = 90/137 (65%)
 Frame = +2

Query: 2    LSAMIRCNETAGLIHGCTIARGAPTISHLLFADDCYFFFKAVEAEANVMKRILCRYEEMS 181
            LS++IR  E +G I G  I + AP ISHLLFADDC+ FFKA   +A  MK IL  YE  S
Sbjct: 1075 LSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSS 1134

Query: 182  GQTINLNKSTIVFSPNTGVEERRGVCEQLGVKEVNNSGNYLGMPMTVGRRKVSTFKFLLE 361
            GQ+IN  KS + +S N     +  + + LGV++V  +G YLG+P  VGR ++STFKF+ E
Sbjct: 1135 GQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFVKE 1194

Query: 362  RIEQKLQIWGNQKISKA 412
            R+ +K+  W ++ +S+A
Sbjct: 1195 RVWKKINSWSSKCLSQA 1211


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/119 (49%), Positives = 81/119 (68%)
 Frame = +2

Query: 56   IARGAPTISHLLFADDCYFFFKAVEAEANVMKRILCRYEEMSGQTINLNKSTIVFSPNTG 235
            +ARGAPT+SHL FADD Y FFKA E+E+  +K+IL RY+ +SGQ INLNKS + F  NT 
Sbjct: 902  VARGAPTVSHLFFADDSYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFIRNTD 961

Query: 236  VEERRGVCEQLGVKEVNNSGNYLGMPMTVGRRKVSTFKFLLERIEQKLQIWGNQKISKA 412
               +RG+C  L VKE  + G YLGMP  VG+ K   F+F+  ++  ++Q W  + +S+A
Sbjct: 962  DVVKRGICSILQVKEQADPGIYLGMPAVVGKNKQQLFEFVRRKVWNRIQNWNGRHLSRA 1020


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/136 (43%), Positives = 84/136 (61%)
 Frame = +2

Query: 5    SAMIRCNETAGLIHGCTIARGAPTISHLLFADDCYFFFKAVEAEANVMKRILCRYEEMSG 184
            SA++   E  G +HG  I +GAP++SHLLFADD     +A   EA  ++ IL  YEE SG
Sbjct: 908  SALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSG 967

Query: 185  QTINLNKSTIVFSPNTGVEERRGVCEQLGVKEVNNSGNYLGMPMTVGRRKVSTFKFLLER 364
            Q IN +KS ++FSPNT   E+R V   L ++    +  YLG+P+ VGR +   F +L ER
Sbjct: 968  QVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKER 1027

Query: 365  IEQKLQIWGNQKISKA 412
            I Q++Q W  + +S+A
Sbjct: 1028 IWQRIQGWKEKLLSRA 1043