BLASTX nr result

ID: Cnidium21_contig00047409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047409
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779...    85   7e-15
gb|ACU18794.1| unknown [Glycine max]                                   85   7e-15
ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arab...    76   3e-12
ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]...    76   3e-12
gb|AAM61614.1| unknown [Arabidopsis thaliana]                          76   3e-12

>ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max]
          Length = 310

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 RETRDTPPAHYVLKVKSFSLFSTNGVDQIMSNNFQVGDYQWKIILFPKG-KNGGKDAQVS 77
           R T D PPAHYV+K++SFSL + N +++  S  F+ G Y+WK++L+P G K+      +S
Sbjct: 9   RSTVDAPPAHYVMKIQSFSLLAKNSIERYESGKFEAGGYKWKLVLYPSGNKSKNIREHIS 68

Query: 76  MYLMLDSTSSLSAGTGVIAFFKFFL 2
           +YL LD TSSL  G  +   F+FFL
Sbjct: 69  LYLALDDTSSLHHGWEIYVNFRFFL 93


>gb|ACU18794.1| unknown [Glycine max]
          Length = 276

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 RETRDTPPAHYVLKVKSFSLFSTNGVDQIMSNNFQVGDYQWKIILFPKG-KNGGKDAQVS 77
           R T D PPAHYV+K++SFSL + N +++  S  F+ G Y+WK++L+P G K+      +S
Sbjct: 9   RSTVDAPPAHYVMKIQSFSLLAKNSIERYESGKFEAGGYKWKLVLYPSGNKSKNIREHIS 68

Query: 76  MYLMLDSTSSLSAGTGVIAFFKFFL 2
           +YL LD TSSL  G  +   F+FFL
Sbjct: 69  LYLALDDTSSLHHGWEIYVNFRFFL 93


>ref|XP_002883058.1| hypothetical protein ARALYDRAFT_479214 [Arabidopsis lyrata subsp.
           lyrata] gi|297328898|gb|EFH59317.1| hypothetical protein
           ARALYDRAFT_479214 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 VLRETRDTPPAHYVLKVKSFSLFSTNGVDQIMSNNFQVGDYQWKIILFPKG-KNGGKDAQ 83
           +++   D PP HY++K++SFSL + + +++  + +F+ G Y+WK++L+P G K+      
Sbjct: 10  IIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDH 69

Query: 82  VSMYLMLDSTSSLSAGTGVIAFFKFFL 2
           VS+YL L  +SSLS G  V A F+ +L
Sbjct: 70  VSVYLALADSSSLSPGWEVYAVFRLYL 96


>ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
           gi|332642426|gb|AEE75947.1| TRAF-like family protein
           [Arabidopsis thaliana]
          Length = 309

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 VLRETRDTPPAHYVLKVKSFSLFSTNGVDQIMSNNFQVGDYQWKIILFPKG-KNGGKDAQ 83
           +++   D PP HY++K++SFSL + + +++  + +F+ G Y+WK++L+P G K+      
Sbjct: 10  IIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDH 69

Query: 82  VSMYLMLDSTSSLSAGTGVIAFFKFFL 2
           VS+YL L  +SSLS G  V A F+ +L
Sbjct: 70  VSVYLSLADSSSLSPGWEVYAVFRLYL 96


>gb|AAM61614.1| unknown [Arabidopsis thaliana]
          Length = 309

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/87 (37%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 VLRETRDTPPAHYVLKVKSFSLFSTNGVDQIMSNNFQVGDYQWKIILFPKG-KNGGKDAQ 83
           +++   D PP HY++K++SFSL + + +++  + +F+ G Y+WK++L+P G K+      
Sbjct: 10  IIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDH 69

Query: 82  VSMYLMLDSTSSLSAGTGVIAFFKFFL 2
           VS+YL L  +SSLS G  V A F+ +L
Sbjct: 70  VSVYLALADSSSLSPGWEVYAVFRLYL 96


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