BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047384
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              293   1e-77
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-77
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   289   2e-76
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   276   1e-72
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   266   1e-69

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  293 bits (750), Expect = 1e-77
 Identities = 133/179 (74%), Positives = 158/179 (88%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +L+ACA SGLLGLG+RVH +IER+R+KCS  V NAL+DMYAKCGSL  ALS+F+ M  +D
Sbjct: 232 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 291

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHHFY 362
           +VSWNAII GLAMHG+G +ALQLF+RMK EGF PDKVTFVGVLCACTH GFVDEG+H+F+
Sbjct: 292 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 351

Query: 363 NMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALLGACRMHNA 539
            MERDYGV PE+EHYGC++DLLGRGGRL EAF+LVH MP++PN +IWG LLGACRMH+A
Sbjct: 352 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSA 410



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +L AC+    + + E +H  +E+  +   + V N+L+D Y K G L  A  +F+ M  RD
Sbjct: 121 LLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERD 180

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRM----------KQEGFAPDKVTFVGVLCACTHGG 332
            VSWN I+ G    G    A +LF +M           + G   D  T + +L AC   G
Sbjct: 181 TVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSG 240

Query: 333 FVDEGIHHFYNMERD-YGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGA 509
            +  G     ++ER  +     + +   +ID+  + G L  A  + H M ++ + V W A
Sbjct: 241 LLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENALSIFHGM-VRKDVVSWNA 297

Query: 510 LLGACRMH 533
           ++    MH
Sbjct: 298 IIQGLAMH 305


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  293 bits (750), Expect = 1e-77
 Identities = 133/179 (74%), Positives = 158/179 (88%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +L+ACA SGLLGLG+RVH +IER+R+KCS  V NAL+DMYAKCGSL  ALS+F+ M  +D
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 376

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHHFY 362
           +VSWNAII GLAMHG+G +ALQLF+RMK EGF PDKVTFVGVLCACTH GFVDEG+H+F+
Sbjct: 377 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 436

Query: 363 NMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALLGACRMHNA 539
            MERDYGV PE+EHYGC++DLLGRGGRL EAF+LVH MP++PN +IWG LLGACRMH+A
Sbjct: 437 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSA 495



 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
 Frame = +3

Query: 120 YAKCGSLNRALSVFNRMRSRDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTF 299
           Y+K G ++ A  +F++M  ++LV W  +I G A  G  + A+ L+ +M++ G   D  T 
Sbjct: 255 YSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTV 314

Query: 300 VGVLCACTHGGFVDEGIHHFYNMERD-YGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDM 476
           + +L AC   G +  G     ++ER  +     + +   +ID+  + G L  A  + H M
Sbjct: 315 ISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSN--ALIDMYAKCGSLENALSIFHGM 372

Query: 477 PIKPNNVIWGALLGACRMH 533
            ++ + V W A++    MH
Sbjct: 373 -VRKDVVSWNAIIQGLAMH 390



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCG--SLNRALSVFNRMRS 176
           +L AC+    + + E +H  +E+  +   + V N+L+D Y KCG   +  A  VF  M  
Sbjct: 121 LLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAE 180

Query: 177 RDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHH 356
           RD VSWN++I GL   G   +A +LF  M +     D V++  +L      G ++     
Sbjct: 181 RDTVSWNSMIGGLVKVGELGEARRLFDEMPER----DTVSWNTILDGYVKAGEMNAAFEL 236

Query: 357 FYNMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALL 515
           F  M         +  +  ++    + G ++ A  L   MP+K N V W  ++
Sbjct: 237 FEKMP-----ARNVVSWSTMVLGYSKAGDMDMARILFDKMPVK-NLVPWTIMI 283


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  289 bits (740), Expect = 2e-76
 Identities = 132/179 (73%), Positives = 155/179 (86%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +LA+CAESGLLGLG+RVH +IER RYKCSV+V NALVDMYAKCG ++RALSVFN M  +D
Sbjct: 146 ILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKD 205

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHHFY 362
           LVSWN ++ GLAMHG+G +ALQLF+ M+QEGF PDKVT V VLCAC H GFVDEGI +F 
Sbjct: 206 LVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFN 265

Query: 363 NMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALLGACRMHNA 539
           NMERDYG++P IEHYGC++DLLGRGGRL EA++LV  MP++PN VIWG LLGACRMHNA
Sbjct: 266 NMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNA 324



 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
 Frame = +3

Query: 102 NALVDMYAKCGSLNRALSVFNRMRSRDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFA 281
           + +V  Y K G +  A  +F+RM  ++LVSW  I+ G A+ G  + A++ F +M++ G  
Sbjct: 78  STMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLK 137

Query: 282 PDKVTFVGVLCACTHGGFVDEGIHHFYNMER-DYGVIPEIEHYGCIIDLLGRGGRLNEAF 458
           PD  T + +L +C   G +  G     ++ER  Y     + +   ++D+  + G+++ A 
Sbjct: 138 PDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN--ALVDMYAKCGQVDRAL 195

Query: 459 QLVHDMPIKPNNVIWGALLGACRMH 533
            + + M  K + V W  +L    MH
Sbjct: 196 SVFNGMS-KKDLVSWNCMLQGLAMH 219


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  276 bits (706), Expect = 1e-72
 Identities = 122/179 (68%), Positives = 156/179 (87%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +LAACAESGLL LG++VH +I++ R KCSV+V NALVDMYAKCG +++ALS+FN M  RD
Sbjct: 323 ILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRD 382

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHHFY 362
           LVSWN ++ GLAMHG+G +A+QLF++M+QEGF PDKVT + +LCACTH GFVD+G+ +F 
Sbjct: 383 LVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFN 442

Query: 363 NMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALLGACRMHNA 539
           +MERD+G++P IEHYGC+IDLLGRGGRL EAF+LV  MP++PN+VIWG LLGACR+HNA
Sbjct: 443 SMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNA 501



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 37/144 (25%), Positives = 74/144 (51%)
 Frame = +3

Query: 102 NALVDMYAKCGSLNRALSVFNRMRSRDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFA 281
           + +V  Y K G +  A  +F++M  ++LV+W  II G A  G  ++A  L+ +M+  G  
Sbjct: 255 STMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLK 314

Query: 282 PDKVTFVGVLCACTHGGFVDEGIHHFYNMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQ 461
           PD  T + +L AC   G +  G     ++++   +   +     ++D+  + GR+++A  
Sbjct: 315 PDDGTLISILAACAESGLLVLGKKVHASIKK-IRIKCSVNVSNALVDMYAKCGRVDKALS 373

Query: 462 LVHDMPIKPNNVIWGALLGACRMH 533
           + ++M ++ + V W  +L    MH
Sbjct: 374 IFNEMSMR-DLVSWNCMLQGLAMH 396



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSL--NRALSVFNRMRS 176
           +L AC   G L   + +H  +E+  +   + V N+L+D Y+KCG L  N A+ +F  M  
Sbjct: 127 LLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGE 186

Query: 177 RDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHH 356
           +DLVSWN++I GL   G+  +A +LF  M +     D V++  +L      G + +  + 
Sbjct: 187 KDLVSWNSMIGGLVKAGDLGRARKLFDEMAER----DAVSWNTILDGYVKAGEMSQAFNL 242

Query: 357 FYNM-ERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALL 515
           F  M ER+      +  +  ++    + G +  A  L   MP K N V W  ++
Sbjct: 243 FEKMPERN------VVSWSTMVSGYCKTGDMEMARMLFDKMPFK-NLVTWTIII 289


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  266 bits (680), Expect = 1e-69
 Identities = 115/179 (64%), Positives = 151/179 (84%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGSLNRALSVFNRMRSRD 182
           +LAACAESGLLGLGE++H +I+ + +KC+  + NALVDMYAKCG LN A  VFN ++++D
Sbjct: 321 ILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKD 380

Query: 183 LVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIHHFY 362
           +VSWNA++ GLAMHG+G +AL+LF RMK+EGF+P+KVT +GVLCACTH G +D+GI +F 
Sbjct: 381 VVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFS 440

Query: 363 NMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDMPIKPNNVIWGALLGACRMHNA 539
            MERDY ++PE+EHYGC++DLLGR GRL EA +L+ +MP+ PN +IWG LLGACRMHNA
Sbjct: 441 TMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNA 499



 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
 Frame = +3

Query: 120 YAKCGSLNRALSVFNRMRSRDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTF 299
           Y K G +  A  +F++M  ++LVSW  I+ G A  G  R+A+ LF +M++     D  T 
Sbjct: 259 YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTV 318

Query: 300 VGVLCACTHGGFVDEGIH-HFYNMERDYGVIPEIEHYGCIIDLLGRGGRLNEAFQLVHDM 476
           + +L AC   G +  G   H      ++    EI +   ++D+  + GRLN A+ + +D+
Sbjct: 319 MSILAACAESGLLGLGEKIHASIKNNNFKCTTEISN--ALVDMYAKCGRLNIAYDVFNDI 376

Query: 477 PIKPNNVIWGALLGACRMH 533
             K + V W A+L    MH
Sbjct: 377 KNK-DVVSWNAMLQGLAMH 394



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   VLAACAESGLLGLGERVHETIERSRYKCSVHVCNALVDMYAKCGS--LNRALSVFNRMRS 176
           +L  C  +  L + E VH  IE+  +   V V N+L+D Y+KCGS  ++ A  +F  M +
Sbjct: 124 LLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGA 183

Query: 177 -RDLVSWNAIIHGLAMHGNGRQALQLFTRMKQEGFAPDKVTFVGVLCACTHGGFVDEGIH 353
            RD+VSWN++I GLA  G   +A ++F  M ++    D +++  +L      G +D+   
Sbjct: 184 RRDVVSWNSMISGLAKGGLYEEARKVFDEMPEK----DGISWNTMLDGYVKVGKMDDAFK 239

Query: 354 HFYNMERDYGVIPEIEHYGCIIDLLG--RGGRLNEAFQLVHDMPIKPNNVIW 503
            F  M       PE         +LG  + G +  A  L   MP+K N V W
Sbjct: 240 LFDEM-------PERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSW 283