BLASTX nr result
ID: Cnidium21_contig00047381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047381
(399 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containi... 164 5e-39
emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera] 163 1e-38
ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|2... 148 5e-34
gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japo... 148 5e-34
gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indi... 148 5e-34
>ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product
[Vitis vinifera]
Length = 517
Score = 164 bits (416), Expect = 5e-39
Identities = 80/132 (60%), Positives = 102/132 (77%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
+VAVLSGCADIGA D G SVHG+V+K+ L D+ VNNAL+DMY+KSG+L L+IF M
Sbjct: 239 IVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 298
Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
+D+F+WTTMISGLALHGKG HA+E F M SG+ PN VT ++VLSAC H+GL+ EG+
Sbjct: 299 KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRS 358
Query: 363 LFKNMILINGFK 398
LF+ M+ +G K
Sbjct: 359 LFQKMVQCHGIK 370
Score = 68.6 bits (166), Expect = 5e-10
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 32/150 (21%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
VV +S C L G+ VHG V + L D V NALIDMYS+SG++E +F M
Sbjct: 106 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 165
Query: 183 FKDLFTWTTMISG----------------------------LALHGKGR---HAVELFDS 269
KD+ +WT++++G + + +G +ELF
Sbjct: 166 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 225
Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEG 356
M A G P V+T VAVLS C G + G
Sbjct: 226 MRAEGKDWPTVITIVAVLSGCADIGAFDLG 255
>emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 163 bits (413), Expect = 1e-38
Identities = 80/132 (60%), Positives = 101/132 (76%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
+VAVLSGCADIGA D G SVHG+V+K+ L D+ VNNAL+DMY+KSG+L L+IF M
Sbjct: 490 IVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 549
Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
+D+F+WTTMISGLALHGKG HA+E F M SG PN VT ++VLSAC H+GL+ EG+
Sbjct: 550 KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRS 609
Query: 363 LFKNMILINGFK 398
LF+ M+ +G K
Sbjct: 610 LFQKMVQCHGIK 621
Score = 68.6 bits (166), Expect = 5e-10
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 32/150 (21%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
VV +S C L G+ VHG V + L D V NALIDMYS+SG++E +F M
Sbjct: 357 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 416
Query: 183 FKDLFTWTTMISG----------------------------LALHGKGR---HAVELFDS 269
KD+ +WT++++G + + +G +ELF
Sbjct: 417 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 476
Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEG 356
M A G P V+T VAVLS C G + G
Sbjct: 477 MRAEGKDWPTVITIVAVLSGCADIGAFDLG 506
>ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|222874597|gb|EEF11728.1|
predicted protein [Populus trichocarpa]
Length = 530
Score = 148 bits (373), Expect = 5e-34
Identities = 73/131 (55%), Positives = 96/131 (73%)
Frame = +3
Query: 6 VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMGF 185
VAVLSGCAD+GA D G++VHG++SK L + + V+NAL+DMYSK G +ES ++IF +
Sbjct: 239 VAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVK 298
Query: 186 KDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
KD+F+WTTMIS + HGKG HA+E+F ML SG+ PN VT++ VLS C HSGL+ E L
Sbjct: 299 KDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKL 358
Query: 366 FKNMILINGFK 398
F MI GF+
Sbjct: 359 FNGMIQCYGFE 369
Score = 66.2 bits (160), Expect = 3e-09
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
VV LS C L GK VHG + + L + V NALIDMY ++G ++ +F MG
Sbjct: 105 VVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMG 164
Query: 183 FKDLFTWTT-------------------------------MISGLALHGKGRHAVELFDS 269
KD+ +WT+ MI+G G +E+F
Sbjct: 165 IKDVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQ 224
Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEGKLLFKNMILIN 389
M A G P V+T VAVLS C G + G+ + + +N
Sbjct: 225 MKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVN 265
>gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 148 bits (373), Expect = 5e-34
Identities = 72/125 (57%), Positives = 91/125 (72%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
+V VLS CADIGALD G+++HG+ SKS ++ V NAL+DMY+KSGS+ S +F +
Sbjct: 254 IVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQ 313
Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
KD FTWTTMIS + G GR AVELF ML SG+ PN VT+V+VLSAC H+GLI+EG+
Sbjct: 314 MKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRE 373
Query: 363 LFKNM 377
LF M
Sbjct: 374 LFDKM 378
Score = 67.4 bits (163), Expect = 1e-09
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Frame = +3
Query: 6 VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLE----------- 152
V LS +G G VHG + + L ++ V NAL+DMY + G E
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 153 --------------------SGLEIFCGMGFKDLFTWTTMISGLALHGKGRHAVELFDSM 272
S L F M K +WT +I+G + A+ELF M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 273 LASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
L G PN +T V VLSAC G ++ G+ +
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAI 273
>gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 148 bits (373), Expect = 5e-34
Identities = 72/125 (57%), Positives = 91/125 (72%)
Frame = +3
Query: 3 VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
+V VLS CADIGALD G+++HG+ SKS ++ V NAL+DMY+KSGS+ S +F +
Sbjct: 254 IVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQ 313
Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
KD FTWTTMIS + G GR AVELF ML SG+ PN VT+V+VLSAC H+GLI+EG+
Sbjct: 314 MKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRE 373
Query: 363 LFKNM 377
LF M
Sbjct: 374 LFDKM 378
Score = 67.4 bits (163), Expect = 1e-09
Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Frame = +3
Query: 6 VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLE----------- 152
V LS +G G VHG + + L ++ V NAL+DMY + G E
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182
Query: 153 --------------------SGLEIFCGMGFKDLFTWTTMISGLALHGKGRHAVELFDSM 272
S L F M K +WT +I+G + A+ELF M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242
Query: 273 LASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
L G PN +T V VLSAC G ++ G+ +
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAI 273