BLASTX nr result

ID: Cnidium21_contig00047381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047381
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]   163   1e-38
ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japo...   148   5e-34
gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indi...   148   5e-34

>ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
           gi|297742795|emb|CBI35475.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/132 (60%), Positives = 102/132 (77%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           +VAVLSGCADIGA D G SVHG+V+K+ L  D+ VNNAL+DMY+KSG+L   L+IF  M 
Sbjct: 239 IVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 298

Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
            +D+F+WTTMISGLALHGKG HA+E F  M  SG+ PN VT ++VLSAC H+GL+ EG+ 
Sbjct: 299 KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRS 358

Query: 363 LFKNMILINGFK 398
           LF+ M+  +G K
Sbjct: 359 LFQKMVQCHGIK 370



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 32/150 (21%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           VV  +S C     L  G+ VHG V +  L  D  V NALIDMYS+SG++E    +F  M 
Sbjct: 106 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 165

Query: 183 FKDLFTWTTMISG----------------------------LALHGKGR---HAVELFDS 269
            KD+ +WT++++G                            +  + +G      +ELF  
Sbjct: 166 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 225

Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEG 356
           M A G   P V+T VAVLS C   G  + G
Sbjct: 226 MRAEGKDWPTVITIVAVLSGCADIGAFDLG 255


>emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
          Length = 768

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/132 (60%), Positives = 101/132 (76%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           +VAVLSGCADIGA D G SVHG+V+K+ L  D+ VNNAL+DMY+KSG+L   L+IF  M 
Sbjct: 490 IVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP 549

Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
            +D+F+WTTMISGLALHGKG HA+E F  M  SG  PN VT ++VLSAC H+GL+ EG+ 
Sbjct: 550 KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRS 609

Query: 363 LFKNMILINGFK 398
           LF+ M+  +G K
Sbjct: 610 LFQKMVQCHGIK 621



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 32/150 (21%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           VV  +S C     L  G+ VHG V +  L  D  V NALIDMYS+SG++E    +F  M 
Sbjct: 357 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 416

Query: 183 FKDLFTWTTMISG----------------------------LALHGKGR---HAVELFDS 269
            KD+ +WT++++G                            +  + +G      +ELF  
Sbjct: 417 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 476

Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEG 356
           M A G   P V+T VAVLS C   G  + G
Sbjct: 477 MRAEGKDWPTVITIVAVLSGCADIGAFDLG 506


>ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|222874597|gb|EEF11728.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/131 (55%), Positives = 96/131 (73%)
 Frame = +3

Query: 6   VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMGF 185
           VAVLSGCAD+GA D G++VHG++SK  L + + V+NAL+DMYSK G +ES ++IF  +  
Sbjct: 239 VAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVK 298

Query: 186 KDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
           KD+F+WTTMIS  + HGKG HA+E+F  ML SG+ PN VT++ VLS C HSGL+ E   L
Sbjct: 299 KDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKL 358

Query: 366 FKNMILINGFK 398
           F  MI   GF+
Sbjct: 359 FNGMIQCYGFE 369



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           VV  LS C     L  GK VHG + +  L  +  V NALIDMY ++G ++    +F  MG
Sbjct: 105 VVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMG 164

Query: 183 FKDLFTWTT-------------------------------MISGLALHGKGRHAVELFDS 269
            KD+ +WT+                               MI+G    G     +E+F  
Sbjct: 165 IKDVSSWTSLLNGFVMCNGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQ 224

Query: 270 MLASGLT-PNVVTYVAVLSACGHSGLIEEGKLLFKNMILIN 389
           M A G   P V+T VAVLS C   G  + G+ +   +  +N
Sbjct: 225 MKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVN 265


>gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
          Length = 545

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/125 (57%), Positives = 91/125 (72%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           +V VLS CADIGALD G+++HG+ SKS    ++ V NAL+DMY+KSGS+ S   +F  + 
Sbjct: 254 IVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQ 313

Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
            KD FTWTTMIS   + G GR AVELF  ML SG+ PN VT+V+VLSAC H+GLI+EG+ 
Sbjct: 314 MKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRE 373

Query: 363 LFKNM 377
           LF  M
Sbjct: 374 LFDKM 378



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
 Frame = +3

Query: 6   VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLE----------- 152
           V  LS    +G    G  VHG + +  L  ++ V NAL+DMY + G  E           
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182

Query: 153 --------------------SGLEIFCGMGFKDLFTWTTMISGLALHGKGRHAVELFDSM 272
                               S L  F  M  K   +WT +I+G     +   A+ELF  M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242

Query: 273 LASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
           L  G  PN +T V VLSAC   G ++ G+ +
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAI 273


>gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
          Length = 545

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/125 (57%), Positives = 91/125 (72%)
 Frame = +3

Query: 3   VVAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLESGLEIFCGMG 182
           +V VLS CADIGALD G+++HG+ SKS    ++ V NAL+DMY+KSGS+ S   +F  + 
Sbjct: 254 IVGVLSACADIGALDLGRAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQ 313

Query: 183 FKDLFTWTTMISGLALHGKGRHAVELFDSMLASGLTPNVVTYVAVLSACGHSGLIEEGKL 362
            KD FTWTTMIS   + G GR AVELF  ML SG+ PN VT+V+VLSAC H+GLI+EG+ 
Sbjct: 314 MKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRE 373

Query: 363 LFKNM 377
           LF  M
Sbjct: 374 LFDKM 378



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
 Frame = +3

Query: 6   VAVLSGCADIGALDFGKSVHGFVSKSVLVRDMAVNNALIDMYSKSGSLE----------- 152
           V  LS    +G    G  VHG + +  L  ++ V NAL+DMY + G  E           
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLV 182

Query: 153 --------------------SGLEIFCGMGFKDLFTWTTMISGLALHGKGRHAVELFDSM 272
                               S L  F  M  K   +WT +I+G     +   A+ELF  M
Sbjct: 183 KDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKM 242

Query: 273 LASGLTPNVVTYVAVLSACGHSGLIEEGKLL 365
           L  G  PN +T V VLSAC   G ++ G+ +
Sbjct: 243 LLEGHRPNHITIVGVLSACADIGALDLGRAI 273


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